DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and LOC103911912

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_021335977.1 Gene:LOC103911912 / 103911912 -ID:- Length:501 Species:Danio rerio


Alignment Length:652 Identity:136/652 - (20%)
Similarity:245/652 - (37%) Gaps:201/652 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 EPPDGG------YGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALC 282
            |.||||      :||.:....|.|:.:..|::||:|:...::|..|..:.:.| |||.:|...:.
Zfish    19 EVPDGGVPLRPCWGWIVAVAFFLVEVFTYGVIKSFGIFLKDLMSDFNETNSRV-SWIISICVFVM 82

  Fly   283 LVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVI 347
            ...||||:.|..||..:.||..||...::|.|.:.|.:|:..:.||.|::||:|..|:..|.:.|
Zfish    83 TFTAPLSTVLSNRFGFQPVVMFGGFLISLGTISTAFTSSINQMYLTIGIVTGLGYCLTFLPTVTI 147

  Fly   348 VSQYFDKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPIS 412
            :||||.:.|::...:..:|.:...|........|....|:..|.:::|.......:...|..|| 
Zfish   148 LSQYFSRRRSVVTAMASTGESFAIFAFAPAFTALKNYIGWRYTFVVIGTLQGITIICGALLHPI- 211

  Fly   413 AYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLN 477
                         ..||             |:.|                               
Zfish   212 -------------VIKP-------------TSQT------------------------------- 219

  Fly   478 YYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSN 542
                          |::.::       |:..|.::|:..|                  .||    
Zfish   220 --------------ETEQKI-------TYTLPGEQVQGFG------------------SSG---- 241

  Fly   543 RGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGI 607
                        |.|:..::.            .:||...:|:.         :.:||:      
Zfish   242 ------------DSVVQSLEQ------------EQGLKSGIELE---------EVEPVQ------ 267

  Fly   608 LDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSV----TLM 668
                           :...:.|:..:.|           .||:::|::..|  :|.|.    ..:
Zfish   268 ---------------VNPKQQDNTSKNR-----------LLDLTVLKEGGF--LCYSAFGLFATL 304

  Fly   669 SVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCI-LG 732
            ....|.:  |:.....|:|..:.:|.|:::..|:.::.|||.:||:.:....  :|.:.|.| :.
Zfish   305 GFFAPQL--YVVELSASLGTERDKAAYMLSTMAISEIFGRLSIGWVMNCGCI--RKIFVLLICVS 365

  Fly   733 AGCAVLTIPFAKTLV-----LVGLSAAVYGLCLG---SWYVLMPVLLA-DVFGTDRISSSYGLVR 788
            ..|.||.:   .|:|     || :...:||..||   |.::  |:|.. ||.|..|:..:.|:..
Zfish   366 LMCLVLVL---FTIVNGFWGLV-VCCVLYGFLLGNIASTHI--PMLAEDDVVGIQRMPLAVGVYV 424

  Fly   789 MFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREEEECE 853
            ..||...::.|||.|::.|::.:|...||...:.|.||.  :.:..:..|:...|..:|:..|..
Zfish   425 CIQSFAGLAGPPLGGVLVDITQNYSAAFYSCAAGMGLGA--IFLGLVRPAKTGHLCRRRKNGENN 487

  Fly   854 EA 855
            .|
Zfish   488 SA 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 49/175 (28%)
MFS <656..827 CDD:119392 49/184 (27%)
MFS_1 658..>847 CDD:284993 52/202 (26%)
LOC103911912XP_021335977.1 2A0111 21..468 CDD:331689 130/627 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578923
Domainoid 1 1.000 128 1.000 Domainoid score I5252
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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