DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and slc16a1a

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:656 Identity:139/656 - (21%)
Similarity:228/656 - (34%) Gaps:245/656 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 GGP-NVEPPDGGYGWFIVFGAF-SVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSAL 281
            ||| ...||:||:||.:|.||| |:.|..| ..||..|.:.|| |...::|::..|||.:|:.|:
Zfish     6 GGPVGYTPPEGGWGWAVVLGAFISIGFSYA-FPKSITVFFKEI-EVIFNATSSQVSWISSIMLAV 68

  Fly   282 CLVLAPLSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIV 346
            .....|:||.|..::..|.::.:||.....|:|.:.|..::..|....||:.|:|...:..|.:.
Zfish    69 MYGGGPVSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALT 133

  Fly   347 IVSQYFDKHRALANGICVSGTAAGSFILPVLIKHLA-------ENCGFHGTILILGGCMLHVCVS 404
            ::.:||.|.|.:||||.::|:       ||.:..||       :..|:.|:.|||||.:|:.||:
Zfish   134 MIGKYFYKKRPIANGIAMAGS-------PVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVA 191

  Fly   405 ATLYRPISAYTDQDSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFL 469
            .:|.|||.              .||                                        
Zfish   192 GSLMRPIG--------------PKP---------------------------------------- 202

  Fly   470 EESKNHLNYYASKQPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYR 534
                         |||                                                 
Zfish   203 -------------QPA------------------------------------------------- 205

  Fly   535 KHSGTDSNRGSRRRRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQP 599
                                                                             
Zfish   206 ----------------------------------------------------------------- 205

  Fly   600 VEQAELGILDSQLVESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLS 664
                                   :.||..:...:||  :|..|.|..::|::|.:...|:|..|.
Zfish   206 -----------------------VKADNSNSRAKER--KTVVEVINGFIDLTLFKHRGFLLYLLG 245

  Fly   665 VTLMSVGCPYMLYYLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCD-------LQLFDR 722
            ..:|..|....|.:|..:..|....:.:|.:|::|.|.:|::.|..:|.:.:       :|.|  
Zfish   246 NVVMFFGLFSPLVFLSNYAKSKQIPREKAAFLLSILAFVDMVARPSMGIVANTKWVRPRVQHF-- 308

  Fly   723 KKTYTLCILGAGCAVLTIPFAKTLVLVGLSAAVYGLCLGSWYVLMPVL---LADVFGTDRISSSY 784
               :...||..|...|..|.:.......:.|..:|...| |  |..||   |.|:.|..|.||:.
Zfish   309 ---FAASILLNGVCHLLAPLSTDYTGFVIYAIFFGFAFG-W--LSSVLFETLMDLVGAQRFSSAV 367

  Fly   785 GLVRMFQSIGAISVPPLAGLMRDLSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREE 849
            |||.:.:....:..|||.|...|:..||:..:...|..:::|:..|.|...:   |::|..:..:
Zfish   368 GLVTIVECGPVLLGPPLLGKFNDIYHDYKYTYMGCGIVLLIGSLFLFVGMGI---NYKLLEREAK 429

  Fly   850 EECEEA 855
            ||.::|
Zfish   430 EESKKA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 60/183 (33%)
MFS <656..827 CDD:119392 46/180 (26%)
MFS_1 658..>847 CDD:284993 51/198 (26%)
slc16a1aNP_001243569.1 2A0113 6..446 CDD:273325 139/656 (21%)
MFS 20..415 CDD:119392 125/617 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578879
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

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