DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sln and LOC100491288

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_031757084.1 Gene:LOC100491288 / 100491288 -ID:- Length:497 Species:Xenopus tropicalis


Alignment Length:629 Identity:149/629 - (23%)
Similarity:248/629 - (39%) Gaps:189/629 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 PPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAPLS 289
            |||||:||.:|.|||....:.....|:..|.:.||.|.|.:|.:.:| ||.:||.|......|:|
 Frog    13 PPDGGWGWMVVLGAFISMGFSYAFSKAITVFFKEIQEHFGASYSEIA-WISSILLAAMYAGGPVS 76

  Fly   290 SALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYFDK 354
            |.|..|:..|.||..||:...:|||::.|::|:|.|.:..||:.|.|..|:..|.:::|.:||.|
 Frog    77 SILVNRYGSRPVVIFGGLLSGVGMIIATFSSSILQLYIFIGVIAGFGFSLNLQPSVIVVGKYFLK 141

  Fly   355 HRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISAYTDQDS 419
            .|.:|||:.::|:......|..|.:.|.:..|:.|:..|||..:|:.||:..|:||         
 Frog   142 KRPIANGLAMAGSPVVLSTLAPLNQFLFDKFGWRGSFFILGALLLNCCVAGALFRP--------- 197

  Fly   420 GQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASKQP 484
                          |.||||                     ||.                 .|:|
 Frog   198 --------------IGPSTT---------------------DKI-----------------QKKP 210

  Fly   485 AQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNRGSRRRR 549
            |||.:.:.::                            |.|.|                      
 Frog   211 AQDLAEKGTN----------------------------ETLLT---------------------- 225

  Fly   550 NVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQLVE 614
               ||     |:         |||..::              :.:.||:                
 Frog   226 ---AN-----KL---------PPSYGTK--------------MEETKQE---------------- 243

  Fly   615 SIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLYYL 679
                                    ||.::....||::|.:...|::..:...:|.......:.:|
 Frog   244 ------------------------TCLQKFNKVLDLTLFKHRGFMIYLVGNVVMFFAFYAPIVFL 284

  Fly   680 PAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTY--TLCILGAGCAVLTIPF 742
            ..:...:|.::..|.:|::|.|::|:..|.|.|.:.:.:....|..|  :..:...|...|..||
 Frog   285 TPYAKHLGVDEYSAAFLLSILAIVDMFARPGTGLIANTKWVRPKIQYFFSFSVTFNGFCHLMCPF 349

  Fly   743 AKTLVLVGLSAAVYGLCLGSWYVLMPVLLADVFGTDRISSSYGLVRMFQSIGAISVPPLAGLMRD 807
            |...|.:.:.:..:||..|....|:...|.|:.|..|.||:.|||.:.:.:..:..||:.|.:.|
 Frog   350 ATGYVGLVVYSVFFGLAFGMVCALLFETLMDLVGVKRFSSAVGLVTIVECVPLLLGPPIGGAIVD 414

  Fly   808 LSGDYEICFYCMGSCMVLGTTPLIVWSILEARNHRLFVQREEEE 851
            ..|||:..::..|:.|||....|.|   :...|:|: :::||:|
 Frog   415 AFGDYKYMYFECGAIMVLAGLFLFV---MNYYNYRM-LEKEEKE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 62/175 (35%)
MFS <656..827 CDD:119392 44/172 (26%)
MFS_1 658..>847 CDD:284993 48/190 (25%)
LOC100491288XP_031757084.1 2A0113 10..448 CDD:273325 146/621 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm48502
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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