DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sln and slc16a5

DIOPT Version :9

Sequence 1:NP_610706.1 Gene:Sln / 36263 FlyBaseID:FBgn0033657 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_002940018.3 Gene:slc16a5 / 100485544 XenbaseID:XB-GENE-1008043 Length:455 Species:Xenopus tropicalis


Alignment Length:611 Identity:121/611 - (19%)
Similarity:208/611 - (34%) Gaps:230/611 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 VEPPDGGYGWFIVFGAFSVQFWVAGLVKSYGVLYVEIMETFPSSTATVASWIPAILSALCLVLAP 287
            :|.|||.:.|.::......|....|.....|:.|.:|..:|.:|. |..||.|:|:.|:.....|
 Frog     1 METPDGPWAWVVLAAVMLTQGLSLGFPSCIGIFYTDIQTSFQASN-TETSWFPSIIMAVLHAGGP 64

  Fly   288 LSSALCQRFSCRTVVFVGGIFCAMGMILSYFATSLLHLLLTFGVLTGIGGGLSTTPGIVIVSQYF 352
            |.:.:.:||.||..|.|||:.|.:||:.|.|:.:::||.|:.|.:.|:|.......||.::..||
 Frog    65 LCTIMVERFGCRVTVMVGGLLCGVGMVTSAFSQTIIHLYLSAGFVGGLGFCFCFQAGITVLGYYF 129

  Fly   353 DKHRALANGICVSGTAAGSFILPVLIKHLAENCGFHGTILILGGCMLHVCVSATLYRPISAYTDQ 417
            .:.|.|||.:..:|.:.|..:.|:..:||.|..|:.|:.|:.||.:|:.||...:.||:      
 Frog   130 IRRRTLANSLASAGASIGMALWPLASQHLLETMGWRGSFLLFGGVLLNCCVCGAIMRPV------ 188

  Fly   418 DSGQGQEETAKPLNEDINPSTTGILTTSTYLDTCDVGAGHELSDKFIEHLFLEESKNHLNYYASK 482
                                                                          .|.
 Frog   189 --------------------------------------------------------------RSL 191

  Fly   483 QPAQDKSAQESDDEVKDIIGETTFIKPMKKVRSSGLLHSVEDLSTDSTWVYRKHSGTDSNRGSRR 547
            :||.:|.....::                   .:|:                ||.|..:.:|   
 Frog   192 EPAHEKEVLAPEE-------------------PNGI----------------KHKGEKTEQG--- 218

  Fly   548 RRNVFANDEVISKIQAHLEKPLSPPSVVSRGLSKSMEIPTPVSNLSDLKQQPVEQAELGILDSQL 612
                                         :||.:.|..        ||                 
 Frog   219 -----------------------------KGLQRYMAF--------DL----------------- 229

  Fly   613 VESIIDGDGHLAADEDDDDDEERGPRTCCERIEMYLDISLLQDPSFILMCLSVTLMSVGCPYMLY 677
                                                   |.:...:.:..|.||.|.:|....|:
 Frog   230 ---------------------------------------LFRHRRYQIYALGVTWMVLGFVLPLF 255

  Fly   678 YLPAHVISIGYNKSEAGYLVAISAVLDLIGRLGLGWLCDLQLFDRKKTYTLCILGAGCAVLTIPF 742
            ||..:..|...::.:|..|:::...:::..|...|.:...::|..:..|.              |
 Frog   256 YLVPYATSNDIDEKKAALLLSLVGFMNIFMRPMAGLVSQQKVFHGRLMYL--------------F 306

  Fly   743 AKTLVLVGLSAAVYGL-----CLGSWYVLMPV-----------LLADVFGTDRISSSYGLVRMFQ 791
            :..::|.|||..|..:     .|.::.||..:           :|.|..|..|...::||..:.:
 Frog   307 SVAVILNGLSNLVCAIWVSFPALLTYCVLYSITMSFIGSLIFQVLMDTVGMKRFPGAFGLFTILE 371

  Fly   792 SIGAISVPPLAGLMRDLSGDYEICFY 817
            ||..::.||||||:.|::|.|.:.||
 Frog   372 SITIMAGPPLAGLLVDITGQYGLVFY 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlnNP_610706.1 MFS 235..>411 CDD:119392 57/175 (33%)
MFS <656..827 CDD:119392 43/178 (24%)
MFS_1 658..>847 CDD:284993 43/176 (24%)
slc16a5XP_002940018.3 MFS_MCT6 9..414 CDD:340983 117/603 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm48502
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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