DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment S2P and rseP

DIOPT Version :10

Sequence 1:NP_610705.1 Gene:S2P / 36262 FlyBaseID:FBgn0033656 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_414718.1 Gene:rseP / 944871 ECOCYCID:EG12436 Length:450 Species:Escherichia coli


Alignment Length:455 Identity:92/455 - (20%)
Similarity:159/455 - (34%) Gaps:112/455 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 LEEIGYYITTLVLCLVVHEMGHALAAVMEDVPVTGFGIKF----------------IFCLPL--- 178
            |.::..:|..|.:.:.|||.||...|....|.|..|.|.|                |..:||   
E. coli     5 LWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGY 69

  Fly   179 ----------AYTELSHDHLNSLRWFRKLRVLCAGIWHNFVFAGVCYLLISTVGIT-MSPL---Y 229
                      ...||.|...|:....::..::.||...||:||...|.|:..:|:. :.|:   .
E. coli    70 VKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEI 134

  Fly   230 AYNQHVVVTELTRKSPLRGERGLQ--------------VDNQITQVNGCPVNSEESWVTCLQ--- 277
            |.|......::...:.|:...|::              :.::.|.:...|..|::.....|.   
E. coli   135 AANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRH 199

  Fly   278 -----------NSLKLKP-GYCVS--ADFVQLNDESSAISHHS------IDGQLQCCDELNPNVS 322
                       :||.::| |..:.  .:.||.|..:|.....:      :|||     .|...|:
E. coli   200 WAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQ-----PLTQWVT 259

  Fly   323 CFEVVEDANGDVPVELPQHVCLNVRR-----TLEEVSEHCSSGVCNEGFC-LRP----------L 371
            ...:|.|..|       :.:.|.:.|     :|..:.|.........||. :.|          :
E. coli   260 FVMLVRDNPG-------KSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKV 317

  Fly   372 IRN---ITAIMTFKRQNFRGEKLPPVIYVGHPWDVTRTVEVSAFVPRYSLLKAAWPDAWL---LL 430
            :|.   ..||:....:.::..|| .|..:|..  :|..|:::......|:.|.|...|.|   ..
E. coli   318 VRQYGPFNAIVEATDKTWQLMKL-TVSMLGKL--ITGDVKLNNLSGPISIAKGAGMTAELGVVYY 379

  Fly   431 LKYNVVFSIGLALINAIPCFGFDGAHITSTVIHSFLVGRVDQHAKRDIISLIITSVGSLLFALAL 495
            |.:..:.|:.|.:||..|....||.|:....|.....|.|.:.     :......:||:|..|.:
E. coli   380 LPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSER-----VQDFCYRIGSILLVLLM 439

  Fly   496  495
            E. coli   440  439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S2PNP_610705.1 S2P-M50 6..>218 CDD:447882 28/113 (25%)
cpPDZ_MBTPS2-like 199..304 CDD:467619 26/139 (19%)
S2P-M50 <427..494 CDD:447882 16/69 (23%)
rsePNP_414718.1 PRK10779 2..450 CDD:182723 92/455 (20%)

Return to query results.
Submit another query.