DRSC/TRiP Functional Genomics Resources

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Protein Alignment S2P and Y56A3A.2

DIOPT Version :9

Sequence 1:NP_610705.1 Gene:S2P / 36262 FlyBaseID:FBgn0033656 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_499537.2 Gene:Y56A3A.2 / 176616 WormBaseID:WBGene00013225 Length:616 Species:Caenorhabditis elegans


Alignment Length:426 Identity:110/426 - (25%)
Similarity:188/426 - (44%) Gaps:62/426 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LLPGVNLPLEEIGYYITTLVLCLVVHEMGHALAAVMEDVPVTGFGIKFIFCLPLAYTELSHDHLN 189
            ::||.|||...|..::..|::..|.||:|||.||....|.|.||||..:...|.|:|::....|.
 Worm   200 IIPGFNLPWGHIPIFMLVLIVAAVFHELGHAWAATSNGVTVNGFGIFILAVYPGAFTDIEAVTLK 264

  Fly   190 SLRWFRKLRVLCAGIWHNFVFAGVCYLLISTVGITMSPLYAYNQHVVVTELTRKSPLRGER-GLQ 253
            ....||:|::..||||||.:.|.:...:.....:.:||:.|....|.|..:..:|.|...| ||.
 Worm   265 RATTFRRLQIFGAGIWHNLLLALLAMAMFHASPVILSPVLANGYGVSVRGVDVRSGLSNPRTGLV 329

  Fly   254 VDNQITQVNGCPVNSEESWVTCLQNSLKLKPGYCVSADFVQLNDESSAISHHSIDGQLQCCDELN 318
            ..:.:..|:.|.|.:...|..|::.|..:..|.||..:.|   :.::|.:|.:...::.||||.|
 Worm   330 AGDVVKSVDECRVETVADWWRCIRTSKNMNNGRCVDRESV---EAATAFNHRTEADEILCCDEFN 391

  Fly   319 PNVS--CFEVVEDANG---DVPVELPQ---------------------------------HVCLN 345
            ...:  ||:..|.|:.   |.....||                                 :.||:
 Worm   392 VTTAHVCFQREEKASKLSVDTQTRAPQLNALLGLEGGGGGRDDALPYGGVAQPEEKKITKYSCLH 456

  Fly   346 VRRTLEE----VSEHCSS----GVCNEGFCLRPLIRNITAIMTFKRQNFRGEKLPPVIYVGHPWD 402
            .|..:::    .||.|.:    ....|..|:.|.:.|.|.::..:..|    :..|:::||...:
 Worm   457 ARYVVQQALCNASEPCKTEETPAAHQEKICVYPALHNGTRLVKIELAN----RNKPILFVGQLNE 517

  Fly   403 VTRTVEVSAFVPRYSLLKAAWPDAWLLLLKYNVVFSIGLALINAIPCFGFDGAHITSTVIHSFLV 467
            :...|.:|:|.||::....:|.:.:.|..||....|:.|.|.||:|.:..||..|    :|:.|.
 Worm   518 MLEMVSISSFTPRFTFASISWLEHFELTAKYLFTLSLALGLFNAMPVYALDGQFI----VHTLLK 578

  Fly   468 GRVDQHAKRDIISLIITSVGS----LLFALALLKVA 499
            .......:|::...:|.:.|:    |...:..:|:|
 Worm   579 SSGLSVRRRELFQYLILTFGTGVLILNIVIGFVKLA 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S2PNP_610705.1 S2P-M50 6..>218 CDD:299148 35/92 (38%)
RseP 136..508 CDD:223821 105/415 (25%)
S2P-M50 <427..494 CDD:299148 18/70 (26%)
Y56A3A.2NP_499537.2 S2P-M50 <185..>282 CDD:324562 32/81 (40%)
S2P-M50 <531..605 CDD:324562 18/77 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156122
Domainoid 1 1.000 142 1.000 Domainoid score I2921
eggNOG 1 0.900 - - E1_COG0750
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9287
Inparanoid 1 1.050 153 1.000 Inparanoid score I2941
Isobase 1 0.950 - 0 Normalized mean entropy S7377
OMA 1 1.010 - - QHG55798
OrthoDB 1 1.010 - - D1012405at2759
OrthoFinder 1 1.000 - - FOG0006242
OrthoInspector 1 1.000 - - oto20163
orthoMCL 1 0.900 - - OOG6_103384
Panther 1 1.100 - - LDO PTHR13325
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9506
SonicParanoid 1 1.000 - - X4524
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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