DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sobp and SOBP

DIOPT Version :9

Sequence 1:NP_001286320.1 Gene:Sobp / 36260 FlyBaseID:FBgn0033654 Length:813 Species:Drosophila melanogaster
Sequence 2:XP_005267098.1 Gene:SOBP / 55084 HGNCID:29256 Length:924 Species:Homo sapiens


Alignment Length:925 Identity:239/925 - (25%)
Similarity:344/925 - (37%) Gaps:290/925 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EMSAKTSPSSTSRDANVGSSSAIPVQIKKELPSDEIKEFAHNTMNELLGWYGFEGVDV-DRLDLT 102
            ||..:..|....|    ....|.||  |:|: ::|:|.||.|||||||||||::.|:: |..|:.
Human     3 EMEKEGRPPENKR----SRKPAHPV--KREI-NEEMKNFAENTMNELLGWYGYDKVELKDGEDIE 60

  Fly   103 AKTSRLLQSAAAAAVANQQSHQLHQLEPHPNLERKRTSLLRSSSRS-------------SLAAAY 154
            .::                       .|.....|:..|:|:.:|..             :::..|
Human    61 FRS-----------------------YPTDGESRQHISVLKENSLPKPKLPEDSVISPYNISTGY 102

  Fly   155 HNNNNNNNNNNNGSSSKNNGGV---------------GGVGVGSGRKSGLMNCSST--TTTPSDH 202
            ......|..:::.:.||::|.|               .|. ||..|      |.|.  ...||..
Human   103 SGLATGNGLSDSPAGSKDHGSVPIIVPLIPPPFIKPPAGT-VGGDR------CPSKYFRNFPSVL 160

  Fly   203 DTRSSREEDSKSPHSIGKPAGA-----AHTDEKIDFSN----CCWCHRPIAENAPDYLTSCDGPR 258
            |:..|.:.......:..:...|     .|..|. |.||    |.||.: :...........:...
Human   161 DSHESYKGVVNLQFNCLESINALLIFFGHWSED-DVSNVQIMCAWCQK-VGIKRYSLSMGSEVKS 223

  Fly   259 YCSESCFAQSRRASFKKAK--------------------------------TCDWCKHVRHAVSY 291
            :|||.|||..|||.||:.|                                .||||||:||...|
Human   224 FCSEKCFAACRRAYFKRNKARDEDGHAENFPQQHYAKETPRLAFKNNCELLVCDWCKHIRHTKEY 288

  Fly   292 VDFQDGASQLQFCSEKCLNQYKMQIFCHETQAHL------DMHPHLRDQAMDAGSEAGLITPDLW 350
            :||.||..:|||||.||||||||.||..||||:|      .:||.:.::|...|.:  |:|||.|
Human   289 LDFGDGERRLQFCSAKCLNQYKMDIFYKETQANLPAGLCSTLHPPMENKAEGTGVQ--LLTPDSW 351

  Fly   351 ---LRNCRSRSASPASTLSVSPGPPPAPAVSRCPDS-----------------PPSHHPSKPLIS 395
               |.:.|.::.||.:|...|.||.|:.:.:..|..                 |.|..|:.|.:|
Human   352 NIPLTDARRKAPSPVATAGQSQGPGPSASTTVSPSDTANCSVTKIPTPVPKSIPISETPNIPPVS 416

  Fly   396 VAPVSKLLAQKSPGPGPGAPPPPPPPVQRHLAGKLGRRKRRGISSSLGSETVASLLQKQQQQQAP 460
            |.|.:.:      ||..|.||..||.|.                ::.|...:...:::|..||. 
Human   417 VQPPASI------GPPLGVPPRSPPMVM----------------TNRGPVPLPIFMEQQIMQQI- 458

  Fly   461 QQHQAPPTLTADFGGSSVPLPPLS-PMPSMQEAPQQQQAPQVPPTQALPR--GPTAIP------A 516
                .||.:......:|.|..||| ||           .|.:.|....||  |||:.|      :
Human   459 ----RPPFIRGPPHHASNPNSPLSNPM-----------LPGIGPPPGGPRNLGPTSSPMHRPMLS 508

  Fly   517 SYFATPSNGVPMGHPFAGRPPPPPHHFMHP---PPHGMMPRGFGPHFGPPLP-PQMPELG--SLL 575
            .:...||.....|:|....|||||...:..   ||..|||.|       |:| |||...|  ||.
Human   509 PHIHPPSTPTMPGNPPGLLPPPPPGAPLPSLPFPPVSMMPNG-------PMPVPQMMNFGLPSLA 566

  Fly   576 GAVPPVTVMVPYPIIIPLPIPIPVPLPVIDFYKAHLT----PEERKRFDEQRAAPTRAENAEEQE 636
            ..|||.|::||||:|:|||:|||:|:|:     .|::    |.......|........::|....
Human   567 PLVPPPTLLVPYPVIVPLPVPIPIPIPI-----PHVSDSKPPNGFSSNGENFIPNAPGDSAAAGG 626

  Fly   637 QP-----QPLDCSKSRSELEEEKPDVEKLSEPGQELD---NDQEEDEKESIPKT----NPDGDTN 689
            :|     .|.|..:..|:..:..|...     ||.|.   ...|....|.:..|    :|.|...
Human   627 KPSGHSLSPRDSKQGSSKSADSPPGCS-----GQALSLAPTPAEHGRSEVVDLTRRAGSPPGPPG 686

  Fly   690 AAS----PSISQESSSSPQ------------QTHCIVRDSTQSEPEADNQKLPKLKITRLQTKRT 738
            |..    |.:.|    .||            :.|.::..:..:..:|:.:               
Human   687 AGGQLGFPGVLQ----GPQDGVIDLTVGHRARLHNVIHRALHAHVKAERE--------------- 732

  Fly   739 LIQTKEAAAECSRPLRKRKRIIDCDFQKMGLKEPEMANDGEQS---NGSSNKEADADPE--AECN 798
                 .:|||       |:....|             .||..|   .|.....|.|.||  |.||
Human   733 -----PSAAE-------RRTCGGC-------------RDGHCSPPAAGDPGPGAPAGPEAAAACN 772

  Fly   799 MSGSHSNSGSAKAKK 813
            :..:.:...:|:..|
Human   773 VIVNGTRGAAAEGAK 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SobpNP_001286320.1 Ribosomal_L24e_L24 275..312 CDD:294589 23/68 (34%)
SOBP 278..587 CDD:291927 116/349 (33%)
SOBPXP_005267098.1 SOBP 275..575 CDD:291927 115/346 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141429
Domainoid 1 1.000 175 1.000 Domainoid score I3643
eggNOG 1 0.900 - - E1_28SIJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 205 1.000 Inparanoid score I3739
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006985
OrthoInspector 1 1.000 - - oto89672
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23186
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5272
SonicParanoid 1 1.000 - - X5073
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.970

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