DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13192 and CG1671

DIOPT Version :10

Sequence 1:NP_610702.1 Gene:CG13192 / 36259 FlyBaseID:FBgn0033653 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_610526.1 Gene:CG1671 / 36019 FlyBaseID:FBgn0033454 Length:787 Species:Drosophila melanogaster


Alignment Length:316 Identity:60/316 - (18%)
Similarity:109/316 - (34%) Gaps:85/316 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LCFQ-ESDRLLAGTIKGSVF-LWDLQTNRSALHFEVGSDPITSLHHTPDRLVTQEKGGTITMFSI 85
            :||. |.||.||.......| |:|.:.:.:.......||.:.||..:.:.|::..|..::.::.:
  Fly   343 MCFMGEHDRYLAVATNSKHFKLYDTEHDMNCKLIVGHSDTVMSLAASQNLLISVGKDCSVRLWRL 407

  Fly    86 GGSSYVKERSIPGNHLGFCRSALHTNTSKTNEQLLFYPCEESSIGVLHVTDAAAPTQILVPDDPQ 150
                         .|...|  :|...|.:.|       |..|:||.:.:|...|           
  Fly   408 -------------QHDKDC--SLEALTQQAN-------CHTSTIGCVAMTHNGA----------- 439

  Fly   151 LPKLGSVTCFKPFECASQLFLLAGYESGHFLTWDISSSVILDVMELAQDATS---------VDYD 206
                      ..|...||        .|....|.:..|        .:|..|         :.:|
  Fly   440 ----------TGFASVSQ--------DGSMKVWQLVRS--------KEDRNSYSFNLRYAALSHD 478

  Fly   207 PVTNRGIVGGPTDKLISFSYQRSSMQMQLGSELCIK------NPGVNGVRIRPDQKVFASAGWDG 265
            ...| .:...|.:|||:.:.|..:.::.|.....::      ..||..||..|..::..::..|.
  Fly   479 KEVN-CVAYAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDC 542

  Fly   266 RIRIFSWKSLRPLAVLTQHKNGGVMDLAFSSQQVAMWHAPIMAAAGMDGQISLWDL 321
            .:||:|..:...:....|...  ::...|      :.|...:.:|..||.:.||::
  Fly   543 TLRIWSISNFSCIKRFDQECT--ILRAEF------LDHGKFIISAASDGLLKLWNI 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13192NP_610702.1 WD40 <18..321 CDD:441893 60/314 (19%)
WD40 repeat 62..98 CDD:293791 4/35 (11%)
WD40 repeat 103..147 CDD:293791 10/43 (23%)
WD40 repeat 200..245 CDD:293791 9/59 (15%)
WD40 repeat 247..282 CDD:293791 7/34 (21%)
CG1671NP_610526.1 WD40 repeat 22..54 CDD:293791
WD40 <24..239 CDD:441893
WD40 repeat 82..115 CDD:293791
WD40 repeat 122..159 CDD:293791
WD40 repeat 167..206 CDD:293791
WD40 repeat 209..236 CDD:293791
WD40 235..625 CDD:441893 60/316 (19%)
WD40 repeat 299..335 CDD:293791
WD40 repeat 340..377 CDD:293791 10/33 (30%)
WD40 repeat 430..476 CDD:293791 11/82 (13%)
WD40 repeat 481..517 CDD:293791 7/36 (19%)
WD40 repeat 524..559 CDD:293791 7/34 (21%)
WD40 repeat 564..600 CDD:293791 7/33 (21%)
WD40 repeat 608..657 CDD:293791
Utp13 653..785 CDD:462540
Blue background indicates that the domain is not in the aligned region.

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