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Protein Alignment ths and Fgf8
DIOPT Version :9
Sequence 1: | NP_610701.2 |
Gene: | ths / 36258 |
FlyBaseID: | FBgn0033652 |
Length: | 748 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038963238.1 |
Gene: | Fgf8 / 29349 |
RGDID: | 70891 |
Length: | 297 |
Species: | Rattus norvegicus |
Alignment Length: | 179 |
Identity: | 38/179 - (21%) |
Similarity: | 62/179 - (34%) |
Gaps: | 48/179 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSNQLERLLFFIVVISGALCTVEDYVIMS-------QCAHNKAIHIAAEG------TVSVTDTSQ 52
:::||.|.| :..|.:.| |...||.|:..||. .:..|||
Rat 124 VTDQLSRRL------------IRTYQLYSRTSGKHVQVLANKRINAMAEDGDPFAKLIVETDT-- 174
Fly 53 IQNITIVGFPDYLNNEFKIALYAKETRRYLCFNDNWRLVGMRELR-DTCYFNETIV-HGYFVFRS 115
|.. ::.:...||..|:|.|...:|:.....: ..|.|.|.:: :.|...::
Rat 175 --------FGS------RVRVRGAETGLYICMNKKGKLIAKSNGKGKDCVFTEIVLENNYTALQN 225
Fly 116 VVDLQRRVGFTHRGKP-VGPKKSVNDACYMFNKIEAEQFFRHHHNNGNS 163
.......:.||.:|:| .|.|...:.....|.| :..|.||....|
Rat 226 AKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMK----RLPRGHHTTEQS 270
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ths | NP_610701.2 |
FGF |
33..137 |
CDD:294048 |
25/112 (22%) |
Fgf8 | XP_038963238.1 |
FGF |
134..257 |
CDD:395115 |
28/138 (20%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_109937 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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