DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir75b

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:540 Identity:107/540 - (19%)
Similarity:197/540 - (36%) Gaps:151/540 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IILIIIFLRIVSSIPDTIISHLSAELQIKIQIYFGLGNDLYDFSRLDGNYQKIIISHNISEEFKT 70
            |:.:.:||.|......|::...||:.....:.::.:.:...:||.|:.::::..|..:....:.|
  Fly    62 ILKLGVFLDINCDKSGTVLDMASAKRFFSHRYHWLIYDRSMNFSVLESHFKEAQIFVDADVTYVT 126

  Fly    71 YHDEPVLIIIRLERDLNLNLATLDVLRSYLTDRQYNDILLIDNDEENLNSYVDIRKAYWNAGFSQ 135
             ||           ..:.|....||   |...||....|.|..|          |:.:.|....:
  Fly   127 -HD-----------PFSKNFLLYDV---YNKGRQLGGELNITAD----------REIFCNKTNCR 166

  Fly   136 VLIYNSQQRTWSI----KPYPYLQIRPTSLKEYIENRNTRNLMGYPLRVLVTNDPPHCFVDKDEL 196
            |..|.|:..|.|.    |.:..|.:|.|::           :...||.|.:          |:..
  Fly   167 VERYLSELYTRSALQHRKSFTGLTMRATAV-----------VTALPLNVSI----------KEIF 210

  Fly   197 PGSPNRYKGSIVTMLKI-------FADQLNATFQANPFREFRRYSTADCV-QMVSD---DEIDAC 250
            ....::|:..:.|..::       ..|.|:..|: ..||:  |:|..:.. .|:.|   |:.|..
  Fly   211 DFMNSKYRIQLDTYARLGYQARQPLRDMLDCKFK-YIFRD--RWSDGNATGGMIGDLILDKADLA 272

  Fly   251 GSIFIRTYTYAT-SQPV---RLNRVVIMAPFGNPIE-----KFYYFFRPFDLYVWIGTGIIVVYI 306
            .:.||.::..|. .||:   .:.|.:.|  |.||..     ....|.:||...||:...::::  
  Fly   273 IAPFIYSFDRALFLQPITKFSVFREICM--FRNPRSVSAGLSATEFLQPFSGGVWLTFALLLL-- 333

  Fly   307 AVMGSLLHRW------HFKEWNVGQYLLLAVQTLLNRELS-------LPQSSSGSKFMLLLLLFA 358
             :.|.||  |      ..|:|...    |....||:....       .|:|..|.  |....|..
  Fly   334 -LAGCLL--WVTFILERRKQWKPS----LLTSCLLSFGAGCIQGAWLTPRSMGGR--MAFFALMV 389

  Fly   359 IGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEELRERFLLV 423
            ..:::.|.|.::    :.:||..:||::                |||      :.::|.:..|.|
  Fly   390 TSYLMYNYYTSI----VVSKLLGQPIKS----------------NIR------TLQQLADSNLDV 428

  Fly   424 EESQHLEKRNGLDPSY---AYVDSEDRMDFY-LYQQKFLRRRR------------MKKLSNPVGY 472
                      |::|:.   .||::.:..|.. ||::|.|..:|            :..:.:..|:
  Fly   429 ----------GIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGF 483

  Fly   473 TWAVQVIKQNWVLEKHYNDH 492
            .:...|......:.||:..|
  Fly   484 VYITGVATGYEFVRKHFLAH 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 60/300 (20%)
Lig_chan 343..585 CDD:278489 37/203 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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