DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48c and Ir60d

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001137757.2 Gene:Ir60d / 7354402 FlyBaseID:FBgn0259187 Length:574 Species:Drosophila melanogaster


Alignment Length:600 Identity:120/600 - (20%)
Similarity:231/600 - (38%) Gaps:82/600 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRIILIIIFLRIV---SSIPDTIISHLSAELQIKIQIYFGLGNDLYDFSRLDGNYQKIIISHNIS 65
            :|:.:.:.||..:   |....:::..|..||..|..:..|..:..:.....:.....:    |:.
  Fly     1 MRLAIYVAFLSSIGNRSGFLSSLLMSLGKELHYKTILLVGGSSTCWSLEPFETGVPIL----NLR 61

  Fly    66 EEFKTYHDEP------VLIIIRLERDLNLNLATLDVLRSYLTDRQYNDILLIDNDEENLNSYVDI 124
            .|...|..:.      .|..::.|.:..:.|    :.|| |.|.:....||..:.||:::..:.:
  Fly    62 GENNAYPQDTFNSQMLALACLQTESEDAVKL----LYRS-LKDMRDTPTLLFASSEEHIHDTLFL 121

  Fly   125 ---RKAYWNAGFSQVLIYNSQQRTWSIKPYPYLQIRPTSLKE---YIENRNTRNLMGYPLRVLVT 183
               |:...|.   ..|..:|::..:|.:.:|..::....|.|   |.|.: .::|.|:.:..|..
  Fly   122 GCFRENMLNV---LALTASSKEFIYSYQAFPTFRVIKRKLVEIHRYFEPQ-LKDLGGHIVSALPG 182

  Fly   184 NDPPH--CFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQAN----PFREFRRYSTADCVQMV 242
            |..|.  |:.:.:    ...:..|.:.|.::.:.:.:|.|.:.:    |..:.|..:.:   ::.
  Fly   183 NIMPRTMCYRNAE----GERQLAGYLNTFIRNYVESINGTLRISWGLVPEDDMRHLTIS---RLS 240

  Fly   243 SDDEIDACGSIFIRTYTYATSQPV--RLNRVVIMAPFGNPIEKFYYFFRPFDLYVWIGTGIIVVY 305
            ....:|....| |..|.....|.|  .::...:|.|....:.:.:       |:|.:|...::..
  Fly   241 KIQHVDFPLGI-IPLYNKTDKQHVYMEISSWFLMLPMETSVPRAH-------LFVKLGLERLLPI 297

  Fly   306 IAVMGSLLHRWHFKEWNVGQ----YLLL--AVQTLLNRELSLPQSSSGSKFMLLLLLFAIGFILS 364
            |.|:|::|...|..|..:|.    |.|.  .::..|.:.:.||:..|....::..||...||.||
  Fly   298 IVVVGAVLGNAHRIEVGLGPSWRCYYLADKVLRGALAQPIVLPRRLSPKLMLIYSLLLLSGFFLS 362

  Fly   365 NLYVALLSMMLTTKLYQRP----IENLADLKAANVNILLQTHNIRPNSV---------YGSSEEL 416
            |.|:|    .|||.|...|    |.....|:..::.:|......:..|:         |||.   
  Fly   363 NYYMA----SLTTWLVHPPASDRILEWDQLRYLHLKVLTIPEEFKYMSLILGTDFMTAYGSI--- 420

  Fly   417 RERFLLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLSNPVGYTWAVQ--VI 479
               |.|...:....:|..:||||||..:.....|....|..|||...::..:.|...:.|.  .:
  Fly   421 ---FQLTNSTDFQRRRISMDPSYAYPVTTSLWPFLELSQVRLRRPLFRRSYDMVLQPFQVMSLPL 482

  Fly   480 KQNWVLEKHYNDHVQRFFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIEPLRLEDIVMAAMVL 544
            .:|.:..|....:.....||||........:...|..|.:.:...:......|:..|..:..:..
  Fly   483 PRNSIFHKSLLRYAALTRETGLYYYWFRRSYYELVALGKISYKEEEGNPYCDLKWNDFRIVWLAF 547

  Fly   545 GGGHALAVICFLVEL 559
            .||..::.:..|:|:
  Fly   548 LGGTIISCLALLLEV 562



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C043
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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