DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir100a

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:633 Identity:125/633 - (19%)
Similarity:221/633 - (34%) Gaps:167/633 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TIISHLSAELQIKIQIYFGLGNDLYDFSRLDGNYQKIIIS-----------------------HN 63
            :|:..|...|::.::.....||||..|  |......||||                       |.
  Fly    31 SIVKQLEGGLELHLRTSEDGGNDLVQF--LMQEKSSIIISAKQEEVPSRAKIMRHHFFIFDGVHQ 93

  Fly    64 ISEEFKTYHDEPVLIIIRLERDLNLNLATLDVLRSYLTDRQYNDILLIDNDEENLNSYVDIRKAY 128
            :.|...:..:.....|:.||.:      |::           :|:||::...:....:...|..|
  Fly    94 MQEIRTSLFNTDGFYILALENN------TIE-----------DDVLLMEFAADVWLQHGHSRIYY 141

  Fly   129 WNAGFSQVLIYNSQQRTWSIKPYPYLQ--IRPTSLKEYIENRNTRNLMGYPLRVLVTNDPPHCFV 191
            .......||::|           |:||  :.....|.|  :|..::|.||.||:.:.:.     |
  Fly   142 VQLSKKSVLLFN-----------PFLQRLVVVQDSKTY--SRIYKDLEGYHLRIYIFDS-----V 188

  Fly   192 DKDELPGSPNR---YKGSIVTMLKIFADQLNATFQAN---PFREF-------RRYSTADCVQMVS 243
            ....:....|:   ..|:...:.|..|.|||  |.|:   |..||       ..||..  |....
  Fly   189 YSSVIGDGENKVLSVTGADAKLAKTVARQLN--FTADFVWPDDEFFGGRLANGEYSGG--VGRAH 249

  Fly   244 DDEIDAC-GSIFIRTY--TYAT-SQPVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVWIGTGIIVV 304
            ..|:|.. ...||:.|  |:.. |..|.::.:.:.......|.:.........:.||    :..:
  Fly   250 RGEVDIIFAGFFIKDYLTTHIQFSAAVYMDELCLYVKKAQRIPQSILPLFAVHMDVW----LCFL 310

  Fly   305 YIAVMGSLLHRWHFKEWNVGQYLLLAVQTLLNRELSLPQSSSGSK-------------------- 349
            .:.::|:|:       |    .:|.||..:|..| .:|..|..::                    
  Fly   311 LVGLLGALV-------W----LILRAVNLILGIE-GVPDGSRATRISYFGAARRIFVDTWVIWVR 363

  Fly   350 --------------FMLLLLLFAIGFILSNLYVALLSMMLTT----KLYQRPIENLADLKAANVN 396
                          |:..|.|.::      ::.|||...|.|    .||.|.:..|.:|..:...
  Fly   364 VNVGRFPPFHSERIFVASLCLVSV------IFGALLESSLATVYIRPLYYRDVNTLRELDESGQP 422

  Fly   397 ILLQTHNIRPNSVYGSSEELRER----FLLVEESQH-----LEKRNGLDPSYAYVDSEDRMDFYL 452
            |.::....:.:..||.:.|:..|    .:||.|.:.     :.||.|    :|.|.....:.  |
  Fly   423 IYIKHPAFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLIEMVSKRGG----FAGVTRSASLQ--L 481

  Fly   453 YQQKFLRRRRMKKLSN-PVGYTWAVQVIKQNWVLEKHYNDHVQRFFETGLQNKLVDDVHELAVKA 516
            ...:::..:::.|:.. |..|..|..:.:.:..||: .|..|.|....|:......:..|.|..:
  Fly   482 SDIRYVMTKKVHKIPECPKNYHIAYVLPRPSPYLEE-VNRIVLRLVAGGIVGLWTGEAKERAKWS 545

  Fly   517 GFLHFFPTQTQTIE-----PLRLEDIVMAAMVLGGGHALAVICFLVEL 559
              :..||.....::     .|.|.|:.:|...|..|..|:.|..:.|:
  Fly   546 --IQRFPEYLAELDVGRWKVLTLSDVQLAFYALTIGCLLSAIVCMAEI 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 14/48 (29%)
Lig_chan <439..580 CDD:278489 30/149 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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