DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48c and Ir68b

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:617 Identity:127/617 - (20%)
Similarity:218/617 - (35%) Gaps:148/617 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 YFGLGNDLYDFSRLDGNYQKIIISHNISEEFKTYHDEPVLIIIRL---ERDLNLNLATLDVLRSY 99
            |..|..|||   |..|:...:|..:..:.|.:.:.....|.|.::   |:..:|....||:|..:
  Fly    51 YSALELDLY---RCVGSRLPVITRNMEAHELEPFRRTDSLSIFQIPAAEKGDSLVRRILDMLNPH 112

  Fly   100 LTDRQYNDILLIDNDEENLNSYVDIRKAYW-NAGFSQVL----------------IYNSQQRTWS 147
            ...:..:..|.:                 | |||..|:|                |...:..|:.
  Fly   113 QRRKHMHKYLFV-----------------WPNAGRHQLLRLFRGSWAKKLLYGLAITGRENGTFD 160

  Fly   148 IKPYPY--LQIRPTSLKEYIENRNTRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNR---YKGSI 207
            ..|:.:  ||:......|....|..::|.|||||..:..||...      :|.||..   |:...
  Fly   161 FDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLRFSMFTDPLMA------MPRSPVETAGYQAVD 219

  Fly   208 VTMLKIFADQLNAT----FQANPFREFRRYSTADCVQMVSD----DEIDACGSIFIRTYTYATSQ 264
            ....::..:.|||:    |..:.....|.....:...:|||    ....|..|.|:....:...:
  Fly   220 GVAARVVGEMLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGGHTHFAPNSRFVLDCIWPAVE 284

  Fly   265 ---PVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVW---IGTGIIVVYIA-VMGSLLHR------- 315
               |.....:.::.|......::..|.|.|...||   :.|.::||.:. ||..|..|       
  Fly   285 VLYPYTRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVI 349

  Fly   316 -----WH-----FKEWNVGQYLLLAVQTLLNRELSLPQSSSGSKFMLLLLLFAIGFILSNLYVAL 370
                 |:     |.:.:||:           ....|...||...|::..:||:  ::||.:|.|.
  Fly   350 QFQATWYEILEMFGKTHVGE-----------PAGRLSSFSSMRTFLMGWILFS--YVLSTIYFAK 401

  Fly   371 LSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEELRERFLLVEESQH--LEKRN 433
            |........|:..::.:.||...:|:|...|      ::|.:...      .:.|.|:  ||.|:
  Fly   402 LESGFVRPSYEEQVDRVDDLVHLDVHIYAVT------TMYDAVRS------ALTEHQYGLLENRS 454

  Fly   434 -----GLDPSY--AYVDSEDRMDFYL----YQQKFLRRRRMKKLSNPVGYTWAVQVIKQ---NWV 484
                 |:..||  ..|...||...::    :.:.||......:...| .|..|.:.::.   .::
  Fly   455 RQLPLGIATSYYQPVVRRRDRRAAFIMRDFHARDFLAITYDSQAERP-AYHIAREYLRSMICTYI 518

  Fly   485 ----------LEKHYNDHVQR-FFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIE-----PLR 533
                      ||..|:..::. |||...|..|:..|........||.....||.|..     .:|
  Fly   519 LPRGSPFLHRLESLYSGFLEHGFFEHWRQMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIR 583

  Fly   534 LEDIVMAAMVLGG-------GHALAVICFLVE 558
            .:.:|:...:|.|       |..::.:.|.||
  Fly   584 NKKVVLTLDILQGAFYLWSVGIGISCLGFAVE 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 61/299 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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