DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir68a

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:729 Identity:129/729 - (17%)
Similarity:241/729 - (33%) Gaps:239/729 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILIIIF--LRIVSSIPDTI-----ISHLSAELQIKIQIYFGLGN--------------DLYDFSR 50
            |||:.|  |.:.:|||..|     :|....:|:|.:|....:.|              .:||...
  Fly     6 ILIVAFISLAMATSIPIPIANPAPLSGYEMQLKILLQKILWVANVKRCFAVITDDLHYPIYDRIF 70

  Fly    51 LDGNYQKII----ISHNISEEFKTYHDEPVLIIIRLE-RDLNLNLATL----DVLR--SYLTDRQ 104
            .:...:::|    :..|.|::.:....:..|.:..:: .|..||:.|:    .|.|  .|:.|.:
  Fly    71 FESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSSDCELNVITILNGWQVQRFLGYIYDNR 135

  Fly   105 ----------YNDILLIDNDEENLNSYVDIRKAYWNAGFSQVLIYNSQQRTWSIKPYPYLQIRPT 159
                      .:|:.|.::|..:|          |:.....:.:.......::|....:    |.
  Fly   136 SLNMQKKFVLLHDLRLFESDMIHL----------WSVFIDAIFLKRQLDNKYTISTIAF----PG 186

  Fly   160 SLKEYIENRN-------------------TRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNRYKG 205
            .|...:..:|                   |.||.|..|.|.::...|...     ...:...::|
  Fly   187 ILSGVLVMKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVL-----WANATKSFQG 246

  Fly   206 SIVTMLKIFADQLN-------------------------ATFQANPFREFRRYSTADCVQMVSDD 245
            ..|.::......||                         |....||....:..:..|.:.:   |
  Fly   247 VEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLV---D 308

  Fly   246 EIDACGSIF-------IRTY--TYATSQPVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVWIGTGI 301
            |:.|..:.|       .:.|  ....|.|.....:..:.|..:....:..|..||...:|:|   
  Fly   309 EVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVG--- 370

  Fly   302 IVVYIAVMGSLLHRWHFK----EWNVGQYLLLAVQTLLNRE----------------LSLPQSSS 346
            :::.:.|:|::.:...|.    ..||.......::.  ||.                :|..:||.
  Fly   371 VLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRP--NRNVPMDPKIYRRISFRIAISRYRSSK 433

  Fly   347 GSKF---------MLLLLLFAIGFILSNLYVALLSM-----------------MLTTKLYQRPIE 385
            |.:.         ..:||.:::     .|||||..|                 :|....|:....
  Fly   434 GDRMPRDLFDGYTNCILLTYSM-----LLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFT 493

  Fly   386 NLADLKAANVNI-----LLQTHNIRPNS-------------------------VYGSSEELRERF 420
            .:....||.|.|     ||::| |.|::                         |:|.|::|..| 
  Fly   494 AILANPAARVTIDTLEDLLRSH-IPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSR- 556

  Fly   421 LLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLR-----RRRMKKLSNPVGYTWAVQVIK 480
              :.:.|           .||.|:|    |||   ::||     ...:..:...|.|...|..::
  Fly   557 --IAKGQ-----------CAYYDNE----FYL---RYLRVADESGSALHIMKECVLYMPVVLAME 601

  Fly   481 QNWVLEKHYNDHVQRFFETGLQNK-LVDDVHELAVKAGFLHFFPTQTQTIEPLRLEDIVMAAMVL 544
            :|..|:...:..:|...|.||..| |.|.:..|..:|      ..|.:.:  :.::....:.:.|
  Fly   602 KNSALKPRVDASIQHLAEGGLIAKWLKDAIEHLPAEA------LAQQEAL--MNIQKFWSSFVAL 658

  Fly   545 GGGHALAVICFLVE 558
            ..|:.::::..|.|
  Fly   659 LIGYVISMLTLLAE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 53/266 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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