DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48c and Ir56c

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:546 Identity:115/546 - (21%)
Similarity:224/546 - (41%) Gaps:100/546 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HNISEEFKTYHDEPVLIIIRLERDLNLNLATLDVLRSYLTDRQY--NDILLIDNDEENLNSYVDI 124
            :::|..|.|..::|:                :.|....|..|.:  :.::.:|...:....|..:
  Fly    69 NHMSFVFTTGAEDPI----------------MKVFSKVLLGRHFYVSMVIYVDKVGDMHPIYDLL 117

  Fly   125 RKAYWNAGFSQVLIYNSQQ---RTWSIKPYPYLQI-RPTSLKEYI-----ENRNTRNLMG----- 175
            ..||....|:.::.:.|.:   :.:.:..:|.:.. ..|...:|:     :.:|.|:.:|     
  Fly   118 TFAYNQQFFNSMVHFESMEGVNQLFGVSKFPVMSFENRTDFLKYMGKIWKQVQNARSDVGGFGFT 182

  Fly   176 YPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQANPFREF---------R 231
            .|||    .|.||.|       .|...|.||...:::.|...:|.:     |:|.         :
  Fly   183 TPLR----QDLPHLF-------QSQGHYDGSTYRIIETFVRFINGS-----FKELIMPPDSLGGQ 231

  Fly   232 RYSTADCVQMVSDDEIDACG---SIFIRTYTYATSQPVRLNRVVIMAPFGNPIEKFYYFFRPFDL 293
            ..:..|.:|::.:.:::.|.   ::|:.......|.|:.:.:..:|.|..|.:..::|..:|||.
  Fly   232 VINMKDALQLIRERKMEFCAHAYALFMSDEELEKSYPLLVVQWCLMVPLYNSVSTYFYPLQPFDW 296

  Fly   294 YVW---IGTGIIVVYIAVMGSLLHRW--HFKEW--------NVGQYLL-LAVQTLLNRELSLPQS 344
            .||   :|..:.:|.:.:|      |  .|..|        |...|:: :.::..|.:...|   
  Fly   297 NVWFFALGALLALVLLELM------WLRMFGGWSGYRGAVLNSFCYIINVPIEGQLQQPCLL--- 352

  Fly   345 SSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSV 409
                :|:||..:|..||.||..|.:.|..:||..|:...|..:.|:.:|.:.:::..:.:  ..:
  Fly   353 ----RFLLLATVFFHGFFLSAYYTSNLGSILTVNLFHAQINTMNDIVSAQLPVMIIDYEM--EFL 411

  Fly   410 YGSSEELRERFL----LVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLSNPV 470
            ...::||.:.||    .|:.:...|.:...:.|:||..:||..:|...|||.|::|..|..|...
  Fly   412 LNLNKELPQEFLELLRPVDSAVFSEHQTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFKLSSICF 476

  Fly   471 G---YTWAVQVIKQNWVLEKHYNDHVQRFFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIEPL 532
            |   ..:.:|:....|   :.......|...:||.|.........|:.||.:...| .||.....
  Fly   477 GSYHLAFPLQMDSSLW---RDIEYFTFRIHSSGLLNFYARSSFGSALHAGLVQRMP-DTQEYTSA 537

  Fly   533 RLEDIVMAAMVLGGGHALAVICFLVE 558
            .|:.:.:|.::|.....||.|.|::|
  Fly   538 GLQHLAIAFILLLVMSFLAGIVFVLE 563



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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