DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir52a

DIOPT Version :10

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_611041.2 Gene:Ir52a / 36715 FlyBaseID:FBgn0034023 Length:599 Species:Drosophila melanogaster


Alignment Length:633 Identity:129/633 - (20%)
Similarity:243/633 - (38%) Gaps:138/633 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IIFLRIVSSIPDTIISHLSAELQIKIQIYFGLGNDLYDFSRLDGNYQKIIISHNISEEFKT---Y 71
            :|.|..:..:...|:::..:.                |...|:|:..:::...|:.||:.|   |
  Fly     7 VIILGFIGQLSAQILNYTQSR----------------DLELLEGSLFRVLSRLNLEEEYNTLLIY 55

  Fly    72 HDEPVLIIIRLERDLNLNLATLDVLRSYLTDRQYN---DILLID-----NDEENLNSYVDIRKAY 128
            ..|  .:...|.|.|.::..|:.   |..||..::   .||::.     .:|||..:.:.:::  
  Fly    56 GKE--CVFHSLLRKLEISAVTVP---SGSTDYDWSFSTAILILSCGYDAENEENSYTLMKLQR-- 113

  Fly   129 WNAGFSQVLIY---NSQQRT----WSIKPY--------------PYLQIRPTSLKEYIEN----- 167
                 ::.|||   ||:..:    :|:|..              .:...|......|:|.     
  Fly   114 -----TRRLIYLEDNSEPESVCMRYSLKEQHNIAMVKSDFDQSDTFYSCRLFQTPNYVEGHFFKD 173

  Fly   168 -----RNTRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQANPF 227
                 .|.:|:.|..:|.:..:..|...:.:||..|. .:..|.:..|:..:|.:|||.......
  Fly   174 QPIYIENFQNMRGATIRTVADSLVPRTILYRDEKSGE-TKMMGYLGHMINTYAQKLNAKLHFIDT 237

  Fly   228 REF--RRYSTADCVQMVSDDEIDACGSIFIRTYTYATSQ----PVRLNRVVIMAPFGNPIEKFYY 286
            .:.  ::.|..|.:..|::|.:| .|:....:..:....    |..|....:|.|.  |.:    
  Fly   238 SKLGAKKPSVLDIMNWVNEDIVD-IGTALASSLQFKNMDSVWYPYLLTGYCLMVPV--PAK---- 295

  Fly   287 FFRPFDL-YVWIGTGIIVVYIAVMGSL-----LHRWH--FKEWNVGQYLL--LAVQTLLNRELSL 341
              .|::| |..|...:::..|.||..|     ::..|  :|...:...||  .:::.||.:....
  Fly   296 --MPYNLVYSMIVDPLVLSIIFVMLCLFSVLIIYTQHLSWKNLTLANILLNDKSLRGLLGQSFPF 358

  Fly   342 PQS-SSGSKFMLLLLLFAIGFILSNLYVALLSMMLT---TKLYQRPIENL--ADLKAA----NVN 396
            |.: |...|.::.:|.|| ..:::.:|.|.|....|   ::.|.|...::  :.||.|    .||
  Fly   359 PPNPSKHLKLIIFVLCFA-SVMITTMYEAYLQSYFTQPPSEPYIRSFRDIGNSSLKMAISRLEVN 422

  Fly   397 ILLQTHNIRPNSVYGSSEELRERFLLV--EESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLR 459
            :|...:|       ....|:.|..||:  :.|::|..|:..:.|:.:..|.||.:.|..|||.  
  Fly   423 VLTSLNN-------SHFREISEDHLLIFDDLSEYLVLRDSFNTSFIFPVSVDRWNGYEEQQKL-- 478

  Fly   460 RRRMKKLSNPVGYTWAVQVIKQNWVL----------EKH-YNDHVQRFFETGLQNKLVDDVHELA 513
                  .:.|..|. |..:....::|          .:| :.||:.|..|.||............
  Fly   479 ------FAEPAFYL-ATNLCFNQFMLFSPPLRRYLPHRHLFEDHMMRQHEFGLVTFWKSQSFIEM 536

  Fly   514 VKAGFLHFFPTQTQTIE--PLRLEDIVMAAMVLGGGHALAVICFLVEL 559
            |:.|.........:..|  .|.|:||.....:..|...::..||::|:
  Fly   537 VRLGLASMEDLSRKRNEEVSLLLDDISWILKLYLGAMFISSFCFILEI 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 HisJ 178..>280 CDD:440596 21/107 (20%)
Ir52aNP_611041.2 None

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