DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir11a

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster


Alignment Length:509 Identity:98/509 - (19%)
Similarity:175/509 - (34%) Gaps:166/509 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 TWSIKPY-----PYLQIRPTSLKEYIENRNTRNLMG-YPLR----------VLVTNDPPHCFV-- 191
            |:|.|.:     |.:.:|..:..:.|..:..:::.. ||:|          |...:.|||...  
  Fly   192 TYSYKLFKANCTPGITVRQINHFDRITGKPQQSMPDLYPVRNGHLGDCPFNVGAAHMPPHLIYKR 256

  Fly   192 DKDELPGS-----PNRYKGSIVTMLKIFADQLNATFQ----ANPFREFRRYSTADCVQMVSDDEI 247
            .||..|.|     .....|....:|::.|..|....|    ..|.:.|...:.:.|.:.::|..:
  Fly   257 HKDPPPASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGEGNVSGCFRQLADGTV 321

  Fly   248 ----------DACGSIFIRTYTYATSQPVRLNRVVIMAPFGNPIEKFYYFFR------PFDLYVW 296
                      |...|:|.::..|..|     |.|::       :.:..|..|      ||...:|
  Fly   322 SIAIGGLSGSDKRRSLFSKSTVYHQS-----NFVMV-------VRRDRYLGRLGPLILPFRGKLW 374

  Fly   297 IGTGIIVVYIAVMGSLLHRWHFKEW---NVGQYLLLAVQTLLNRELSLP---QSSSGSKFMLLLL 355
             |..|:::.:||:.:.        |   .:|  |...::.||...:..|   ....|..|:..| 
  Fly   375 -GVIIVILLLAVLSTC--------WLRSRLG--LSHPIEDLLTVIVGNPIPDHRLPGKGFLRYL- 427

  Fly   356 LFAIGFILSNLYVALLSMMLTTKL----YQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEEL 416
                          |.|.||.|.:    ||   ..|.|:      :.|..|...|..:.|.   :
  Fly   428 --------------LASWMLLTLVLRCAYQ---ARLFDV------LRLSRHRPLPKDLSGL---I 466

  Fly   417 RERFLLVEESQH------LEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRR---------MKKL 466
            ::.:.:|....|      |..|..||                :..:|.|.:|         :..:
  Fly   467 KDNYTMVANGYHDFYPLELTCRQPLD----------------FSARFERVQRAAPDERLTTIALI 515

  Fly   467 SNPVGYTW---AVQVIKQNWVLEKHYNDHV-----QRFFETGLQNKLVDDVHELAVKAGFLHFFP 523
            || :.| |   ...:.:..:|.:..|..|:     :|||   |:..:...:.:| :.||.:....
  Fly   516 SN-LAY-WNHKHPNISRLTFVRQPIYMYHLVIYFPRRFF---LRPAIDRKIKQL-LSAGVMAHIE 574

  Fly   524 TQTQTIE---------PLRLEDIVMAAMVLGGG---HALAVI----CFLVELFA 561
            .:....|         |:.|..|..:  ::.|.   |.|.::    .|::||.|
  Fly   575 RRYMQYENKRKVASNDPVLLRRITKS--IMNGAYRIHGLVIVLATGMFILELLA 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 9/61 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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