DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir67c

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_729609.1 Gene:Ir67c / 317838 FlyBaseID:FBgn0052058 Length:573 Species:Drosophila melanogaster


Alignment Length:625 Identity:149/625 - (23%)
Similarity:252/625 - (40%) Gaps:141/625 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IIFLRIV-------SSIPDTIISHLSAELQIKIQIYFGLGNDLYDFSRLDGNYQKIIISHNISEE 67
            :|||.|:       |.....:|...:.:.|:::.||            ||.|..::.|...:|..
  Fly     5 LIFLNIILLSDRSESWSAREVIHQFNHDQQLQLNIY------------LDCNDVELQIGQEVSNL 57

  Fly    68 F--KTYHDEPVL-------IIIRLERDLNLNLATLDVLRSYLTDRQYNDILLIDNDEENLNSYVD 123
            |  .|.....:|       :||...:|...| .||:.::..|...||..||.:  .:.|::.|..
  Fly    58 FVNSTADKMKILGRFSSHSLIIACFKDSTRN-RTLNGVKELLWGLQYLPILFV--VDSNMDFYFQ 119

  Fly   124 IRKAYWNAGFSQVLIYNSQQRT-WSIKPYPYLQIRP-TSLKEYIENRNTRNLMGYPLRVLVTNDP 186
            ....:   ||..||..|....: ::.||||.:::.. ..::::.:....|||.|..:|..|....
  Fly   120 QALRH---GFIHVLALNFMNGSLYTYKPYPKVEVHQIKDMQKFYKLTKLRNLQGQAVRTTVETMT 181

  Fly   187 PHCFVDKDELPGSPNR-----YKGSIVTMLKIFADQLNATFQANPFREFRRYSTADCV------Q 240
            |.||..:       ||     |.|.:..|:|.|....|.|       |...:...|.|      .
  Fly   182 PRCFRYR-------NRHGQLVYAGYMYRMVKEFISTYNGT-------EEHVFGNVDTVPYKEGLA 232

  Fly   241 MVSDDEIDACGSIF--IRTYTYATSQPVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVWIGTGIIV 303
            .:.:.|||....|.  :..|.:..|..:...:..||.|:..|:.|..||.:||...|||...:..
  Fly   233 ALKNGEIDMMPRIIHALEWYYFYRSHILYNIKTYIMVPWAEPLPKSLYFIQPFRGTVWITIMVSF 297

  Fly   304 VYIAVM-----------GSLLHR----------------WHFKEWNVGQYLLLAVQTLLNRELSL 341
            ||.:::           .||...                |||   |:|.:.:::           
  Fly   298 VYASIVIWWIRYRQQGNSSLTQSFMDVLQLLFQLPLSKIWHF---NMGTHQVVS----------- 348

  Fly   342 PQSSSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQT----- 401
                       .::||..||:|:|||.|.||..|||.|::..|....||......:|:::     
  Fly   349 -----------FIVLFVFGFMLTNLYTAQLSSYLTTGLFKSQINTFDDLFREKRTLLVESFDAEV 402

  Fly   402 -HNIRPNSVYGSSEELRERFLLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKK 465
             ||:....:.  .:|.....|:....:..:.|..|:.||||...|||:.|.|.||::||....|.
  Fly   403 LHNMTKEKII--QKEFESIILITSIEEVFKHRKSLNTSYAYEAYEDRIAFELSQQRYLRVPIFKI 465

  Fly   466 LSNPVGYTWAVQVIKQN--WVLEKH-------YNDHVQRFFETGLQNKLVDDVHELAVKAGFLHF 521
            |.         :|..|.  :|..:|       :|::::|.||:|:..||.:|.....:.:|.:.|
  Fly   466 LK---------EVYDQRPVFVALRHGLPYVELFNNYLRRIFESGIWIKLQEDSFLEGIASGEISF 521

  Fly   522 FPTQTQTIEPLRLEDIVMAAMVLGGGHALAVICFLVELFA 561
            ..::::.|:....:....|.::||.|..::.|...:||::
  Fly   522 RKSKSREIKIFDKDFYFFAYILLGMGWCVSTIALFLELWS 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir67cNP_729609.1 Lig_chan 288..500 CDD:278489 60/247 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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