DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48c and Ir7c

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster


Alignment Length:583 Identity:110/583 - (18%)
Similarity:198/583 - (33%) Gaps:190/583 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LDVLRSYLTDRQY----------NDILLI------DNDEEN--------LNSYVDIRKAYWNAGF 133
            ||.||||.....|          |...|:      |...|:        ||.||           
  Fly    97 LDSLRSYFRLEMYLNQLGSPYKRNGFFLVIYTGLEDQPMESLKIMFRRLLNMYV----------- 150

  Fly   134 SQVLIYNSQQRTWSIKPYPYLQIRP----TSLKEY-------------------IENRNTRNLMG 175
            ..|.::  .||..::..|.|....|    :||..|                   :..|...|:.|
  Fly   151 LNVNVF--LQRDGTVHLYTYYPYGPHHCQSSLPVYYTAFQDLAAPANGFGLTKPLFPRKLTNMHG 213

  Fly   176 YPLRVLVTNDPPHCFVDKD-ELPG--SPNRYKGSIVTMLKIFADQLNATFQANPFREFRR----- 232
            ..:.|......|:..::.| :.||  |.:..:|.|...|   |:::|.|.:....::..|     
  Fly   214 CEMVVATFEHRPYVIIEDDPKTPGGRSIHGIEGLIFRSL---AERMNFTIKLVEQKDKNRGEILP 275

  Fly   233 -YSTADCVQMVSDDEID----------ACGSIFIRTYTYATSQPVRLNRVVIMAPFGNPIEKFYY 286
             .:....::|:.|.|::          |...:.:.:.:| ||.|     :|::.|.|..|.....
  Fly   276 DGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSY-TSFP-----IVLVVPSGGSISPMGR 334

  Fly   287 FFRPFDLYVWIGTGIIVVYIAVMGSLL----------------HRWHFKEWNVGQYL-LLAVQTL 334
            ..|||...:|....:.:::..|:..||                :|..|    :|.:. ||....|
  Fly   335 LTRPFRYIIWSCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPF----MGMWASLLGGLAL 395

  Fly   335 LNRELSLPQSSSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNI-- 397
            .|     ||.:.....:::.||..:  ||...|...|.::|.....:.||::|:::.|.:...  
  Fly   396 YN-----PQRNFARYILVMWLLQTL--ILRAAYTGQLYLLLQDVEMRSPIKSLSEVLAKDYEFRI 453

  Fly   398 --LLQT--HNIRPNSVYGSSEELRERF--------------LLVEESQHLEKRNGLDPSYAYVDS 444
              .|:|  .:..|.:.:.:...|.|..              ||.......:.|:|.:..:..|..
  Fly   454 LPALRTIFKDSMPTTNFHAVLSLEESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLP 518

  Fly   445 EDRM----DFYLYQQKFLRRR----RMKKLSNPVGYTWAVQVIKQNWVLEKHYNDHVQRFFETGL 501
            :..|    .||:....:.:||    .|..:|:.:...:           .|.|.|.::|.     
  Fly   519 DPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARY-----------RKMYMDRIKRV----- 567

  Fly   502 QNKLVDDVHELAVKAGFLHFFPTQTQTIEP-----LRLEDIVMAAMVLGGGHALAVICFLVEL 559
                                  ::.:.:||     .||..|.:..   .|.:.:|:|.|::|:
  Fly   568 ----------------------SKRRNLEPKPLSIWRLSGIFVCC---AGLYLVALIVFILEI 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 None
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 13/64 (20%)
Lig_chan 343..593 CDD:278489 50/301 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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