DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48c and Ir41a

DIOPT Version :9

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster


Alignment Length:581 Identity:116/581 - (19%)
Similarity:219/581 - (37%) Gaps:144/581 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 YQKIIISH--NISEEFKT--YHDEP-VLIIIRLERDLNLNLATLDVLRSYLTDRQY---NDILLI 111
            :.|.:.:|  |.|.|.:.  :.|:| :|.::   || :.:.::.|:..:....|:.   :.::|:
  Fly   124 HNKFVFAHIANESPESRNHFFEDQPNILFVV---RD-HSSASSFDIKTNKFVGRKAENPSQMILV 184

  Fly   112 DNDEENLNSYV--DIRKAYWNAGFSQVLIYNSQQRTWSIKPYPYLQIRPTSLKEYIENRNTRNLM 174
            |.       |:  :.|..:..:.|:..| .|.|.|...|..:.|   .|.::.::..:.|.:: |
  Fly   185 DR-------YLASEQRFQFGKSLFADKL-NNLQGREVIIAGFDY---PPYTVIKHNMSTNAQD-M 237

  Fly   175 GYPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQ-----ANPF-REFRRY 233
            |    |...:|..:.::|            |:...::..|.:|.|.|.|     ||.: :.:...
  Fly   238 G----VSGESDFKNVYID------------GTETRIVLNFCEQFNCTIQIDSSAANDWGKVYPNM 286

  Fly   234 STADCVQMVSDDEIDAC-GSIF--IRTYTYA-TSQPVRLNRVVIMAPFGNPIEKFYYFFRPFDLY 294
            |....:.|:.:.:.|.| |:::  ...|||. .|..:..:.:..:.|....:..:|....||...
  Fly   287 SGDGALGMLINRKADICIGAMYSWYEDYTYLDLSMYLVRSGITCLVPAPLRLTSWYLPLEPFKET 351

  Fly   295 VWI---------GTGIIVVY-----IAVMGSLLHRWHFKEWNVGQYLLLAVQTLLNRELSLPQSS 345
            :|.         .||:::.|     :.|:......|    |....:   .|.|.....:|...:|
  Fly   352 LWAAILLCLCAEATGLVLAYKSEQALYVLPGYREGW----WTCTSF---GVCTTFKLFISQSGNS 409

  Fly   346 SGSKFMLLLLLFAI---GFILSNLYVALLSMMLTTKLYQRPIENLADLK------AAN------- 394
            ......:.:||||.   ..|::::|...|:.:||........:.:..|:      |||       
  Fly   410 KAYSLTVRVLLFACFLNDLIITSIYGGGLASILTIPSMDEAADTVTRLRFHRLQWAANSEAWVSA 474

  Fly   395 ---------VNILLQTHNIRPNSVYGSSEELRERFLLVEESQHLEKRNGLDPSYAYVDSEDRMDF 450
                     .:||...|      :|...|.||     :.:.||:  |.|.        :.:|:.|
  Fly   475 IRASDEALVKDILYNFH------IYSDDELLR-----LAQDQHM--RIGF--------TVERLPF 518

  Fly   451 -------YLYQQKFLRRRRMKKLSNPVGYTWAVQVIKQNWVLEKHYNDHVQRFFETGLQNKLVDD 508
                   ||..|...:...||   :.:.:.:.|..:.:.|.|....|..:..:..:|.     |.
  Fly   519 GHFAIGNYLGPQAIDQLVIMK---DDIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSGF-----DK 575

  Fly   509 VHELAVKAGFLHF--------FPTQTQTIEPLRLEDIVMAAMVLGG--GHALAVICFLVEL 559
            ..|..|.|..|:.        ..|.|:.|.|:.|.....|..::..  |.|:|.:.||:||
  Fly   576 YWEYRVVADNLNLKIQQQVQETMTGTKDIGPVPLGMSNFAGFIIVWILGSAIATLTFLLEL 636



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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