DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48c and Ir52b

DIOPT Version :10

Sequence 1:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_725469.2 Gene:Ir52b / 246631 FlyBaseID:FBgn0050469 Length:596 Species:Drosophila melanogaster


Alignment Length:631 Identity:129/631 - (20%)
Similarity:244/631 - (38%) Gaps:135/631 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IILIIIFLRIVSS-IPDTIISHLSAELQIKIQIYFGLGN-DLYD----------FSRLDGNYQKI 58
            :::::.||..::: |.|..:.:.|......|.:...|.| :.||          |..:..|....
  Fly     4 LVILLCFLGYMAAHIADISVQNQSLMDNELINLLLKLRNEEFYDTLLVYGKDCEFHSVIKNVDVA 68

  Fly    59 IISHNISEEFKTYHDEPVLII---------------IRLERDLNLNLATLD-----VLRSYLTDR 103
            ::..:.|..|:.......||:               |:|:|:..|.|...|     :...|....
  Fly    69 VVLVSDSMNFEWNFSSLTLILSCGPDIDNGGPNSTSIKLQRNRRLVLLKEDFQPSNICNIYTQKE 133

  Fly   104 QYNDILLIDNDEENLNSYVDIRKAYWNAGFSQVLIYNSQQRTWSIKPYPYLQIRPTSLKEYIENR 168
            |||..|:.:|..::.:.|.  .:.:.:....:|.:..:               :|..::::    
  Fly   134 QYNIALVRENFTKSKSIYT--CRYFQDPNVDEVNLSGT---------------KPIFIEQF---- 177

  Fly   169 NTRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNRYKGSIVTMLKIFADQLNATFQANPFREFRRY 233
              :|:.|..:|::....||...:.:|...|. .:..|.:..::..||.::|||.|.    :|.:.
  Fly   178 --QNMKGKAIRIVPDLLPPRVMLYQDANDGE-LKMIGYVANLITNFAQKVNATLQL----DFLKP 235

  Fly   234 STA--DCVQMVSDDEIDACGSI--FIRTYTYATSQ-PVRLNRVVIMAPFGNPIEKFYYFFRPFDL 293
            ||:  :..:|..|||:|...::  .:.|....||. |..|....:|....   .||     |::|
  Fly   236 STSITEISRMAKDDELDMGITLEASLNTSNLETSSYPYLLTSYCLMVQVP---AKF-----PYNL 292

  Fly   294 -YVWI----GTGIIVVYIAVMGSLL---HRWHFKEWNVGQYLL--LAVQTLLNRELSLPQSSSGS 348
             |..|    ..|||.|...::..||   .:..:::.:|...||  .:::.||.:....|.::|..
  Fly   293 VYALIVDPLVLGIIFVLFLLLSVLLIYSQKMSWQDLSVANILLNDKSLRGLLGQSFPFPLNASKK 357

  Fly   349 KFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLAD---------LKAANVNILLQTHNI 404
            ..::..:|.....:|:.:|.|.|....|....:..|.:..|         :.|..||.|::|:| 
  Fly   358 LRLIFTILCFASIMLTTMYEAYLQSFFTNPPSEPEICSFQDVGSYNRRIAMSALEVNGLIKTNN- 421

  Fly   405 RPNSVYGSSEELRERFLLVEES--QHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLS 467
                  ....|:|...|.:.::  :..|.|:..:.||.||.:.||...|..||...:        
  Fly   422 ------SHFREIRMDDLEIFDNMPECYELRDAFNLSYNYVVTGDRWRSYAEQQTLFK-------- 472

  Fly   468 NPVGY----TWAVQVIKQNWVLEKH------YNDHVQRFFETGLQNKLVDDVHELAVKAGF---- 518
            .||.|    ....::|..:..|.:|      :::|:.:..|.|..|..:.......|:.|.    
  Fly   473 EPVFYFARDLCFSRLIFLSVPLRRHLPYRHLFDEHMMQQHEFGFVNYWMSHSFFDMVRLGLTSLK 537

  Fly   519 -----LHFFPTQTQTIEPLRLEDIVMAAMVLGGGHALAVICFLVEL 559
                 |.:.|:       |.::||.....:......|.|.|||:|:
  Fly   538 DLSRPLAYTPS-------LLMDDISWIMKIYLAAIVLCVFCFLLEI 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48cNP_610700.1 HisJ 178..>280 CDD:440596 26/106 (25%)
Ir52bNP_725469.2 None

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