DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir48b and Ir75b

DIOPT Version :9

Sequence 1:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:651 Identity:133/651 - (20%)
Similarity:234/651 - (35%) Gaps:178/651 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NLLKLLLLLAISSVRTQ--------GLNDIIIELNQRLLISNNFL--YCNQSDKLNEYEI--KYL 60
            :|..|.||....::.||        .|||..  ||..:|....||  .|::|..:.:...  ::.
  Fly    27 SLSHLALLAQSKNIFTQFQPLHSDIQLNDDF--LNHNILKLGVFLDINCDKSGTVLDMASAKRFF 89

  Fly    61 QHMPPISLMIFTSIESMNFTQVEYN-------LGAD---------NKLFLIMGNEEPPYDFLHAL 109
            .|.  ...:|:.  .||||:.:|.:       :.||         :|.||:       ||   ..
  Fly    90 SHR--YHWLIYD--RSMNFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLL-------YD---VY 140

  Fly   110 NLHFQF-AEYIIVIDEPVDLKKSTKWLD-FVNHLWQQGYVQLLIYTSYDEKLYHKIIFPETVIEE 172
            |...|. .|..|..|..:...|:...:: :::.|:.:..:|            |:..|....:..
  Fly   141 NKGRQLGGELNITADREIFCNKTNCRVERYLSELYTRSALQ------------HRKSFTGLTMRA 193

  Fly   173 TLVEQYISIRGSFNNLYGYPVRVAAYNNAPRSMLYVNRWGKHIFAGFYMRF-LRAFIDARNGSFV 236
            |.|...:.:..|...::.:      .|:..|..|     ..:...|:..|. ||..:|.:   |.
  Fly   194 TAVVTALPLNVSIKEIFDF------MNSKYRIQL-----DTYARLGYQARQPLRDMLDCK---FK 244

  Fly   237 PVLTPSNSPGNCTLNLVNETVDVCADALAANPAAFSLTHGF--------------------RIAS 281
            .:.....|.||.|..::.:.:...|| ||..|..:|.....                    |..|
  Fly   245 YIFRDRWSDGNATGGMIGDLILDKAD-LAIAPFIYSFDRALFLQPITKFSVFREICMFRNPRSVS 308

  Fly   282 ANVLVTHAKPLHSYRYLTAPFQWSVWACLVIYVLLVVNFLSFIGWL--RSGKWE---FSKYLLEV 341
            |.:..|.         ...||...||....: :||:...|.::.::  |..:|:   .:..||. 
  Fly   309 AGLSATE---------FLQPFSGGVWLTFAL-LLLLAGCLLWVTFILERRKQWKPSLLTSCLLS- 362

  Fly   342 FSSLLFSGFYL--KEIRGRERYILFGVLFIAGFVYSTEYLGLLKSMLISEVFEKQIDTFEALVES 404
            |.:....|.:|  :.:.||   :.|..|.:..::....|..::.|.|:.:..:..|.|.:.|.:|
  Fly   363 FGAGCIQGAWLTPRSMGGR---MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADS 424

  Fly   405 NITLMVDP--YDKILFAKYNMPEILSPIMELVSFETLLKHRN---------------RFDQDYAY 452
            |:.:.::|  |.:|.......|:    :.:|...:.|...|:               |..:.:.|
  Fly   425 NLDVGIEPTVYTRIYVETSEEPD----VRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFVY 485

  Fly   453 ILFSDRMALYDYAQQ-FLKHP--KLLRIPI-DFSFLYTGIPMRKRW----------------FLK 497
            |  :.....|::.:: ||.|.  :|..||: |.|..:|.:..|..:                ..|
  Fly   486 I--TGVATGYEFVRKHFLAHQICELNEIPLRDASHTHTVLAKRSPYAELIKLSELRMLETGVHFK 548

  Fly   498 HHLGRAWYWAFESGLTRKLALDADFEAVRVGYLSFLITEHVEAQPLNVDYFVMPAIALAIGYILA 562
            |.  |:|       :..||........|.|| |.:       |.||.:  .::.||.|.:| ||.
  Fly   549 HE--RSW-------METKLHCYQHNHTVAVG-LEY-------AAPLFI--ILLGAIILCMG-ILG 593

  Fly   563 L 563
            |
  Fly   594 L 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48bNP_610697.1 None
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 63/322 (20%)
Lig_chan 343..585 CDD:278489 53/270 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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