DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48b and Ir48c

DIOPT Version :9

Sequence 1:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:609 Identity:142/609 - (23%)
Similarity:264/609 - (43%) Gaps:93/609 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NLLKLLLLL----AISSVRTQGLNDIIIELN-----------------------QRLLISNNFLY 45
            :||:::|::    .:||:....::.:..||.                       |:::||:|.  
  Fly     2 SLLRIILIIIFLRIVSSIPDTIISHLSAELQIKIQIYFGLGNDLYDFSRLDGNYQKIIISHNI-- 64

  Fly    46 CNQSDKLNEYEIKYLQHMPPISLMIFTSIESMNFTQVEYNLGADNKLFLIMGNEEPPYDFLHALN 110
               |::...|      |..|:.::|              .|..|..|.|..         |..|.
  Fly    65 ---SEEFKTY------HDEPVLIII--------------RLERDLNLNLAT---------LDVLR 97

  Fly   111 LHFQFAEY--IIVIDEPVDLKKSTKWLDFVNHLWQQGYVQLLIYTSYDEKLYHKIIFPETVIEET 173
            .:....:|  |::||.  |.:....::|.....|..|:.|:|||.| .::.:....:|...|..|
  Fly    98 SYLTDRQYNDILLIDN--DEENLNSYVDIRKAYWNAGFSQVLIYNS-QQRTWSIKPYPYLQIRPT 159

  Fly   174 LVEQYISIRGSFNNLYGYPVRVAAYNNAPRSMLYVNR----WGKHIFAGFYMRFLRAFIDARNGS 234
            .:::||..|.: .||.|||:||...|:.|.  .:|::    ...:.:.|..:..|:.|.|..|.:
  Fly   160 SLKEYIENRNT-RNLMGYPLRVLVTNDPPH--CFVDKDELPGSPNRYKGSIVTMLKIFADQLNAT 221

  Fly   235 FVPVLTPSN--------SPGNCTLNLVNETVDVCADALAANPAAFSLTHGFRIASANVLVTHAKP 291
            |     .:|        |..:|...:.::.:|.|. ::......::.:...|:....::.....|
  Fly   222 F-----QANPFREFRRYSTADCVQMVSDDEIDACG-SIFIRTYTYATSQPVRLNRVVIMAPFGNP 280

  Fly   292 LHSYRYLTAPFQWSVW---ACLVIYVLLVVNFLSFIGWLRSGKWEFSKYLLEVFSSLLFSGFYLK 353
            :..:.|...||...||   ..:|:|:.::.:.|.  .| ...:|...:|||....:||.....|.
  Fly   281 IEKFYYFFRPFDLYVWIGTGIIVVYIAVMGSLLH--RW-HFKEWNVGQYLLLAVQTLLNRELSLP 342

  Fly   354 EIRGRERYILFGVLFIAGFVYSTEYLGLLKSMLISEVFEKQIDTFEALVESNITLMVDPYDKILF 418
            :.....:::|..:||..||:.|..|:.||..||.::::::.|:....|..:|:.:::..::....
  Fly   343 QSSSGSKFMLLLLLFAIGFILSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPN 407

  Fly   419 AKYNMPEILSPIMELVSFETLLKHRNRFDQDYAYILFSDRMALYDYAQQFLKHPKLLRIPIDFSF 483
            :.|...|.|.....||.....|:.||..|..|||:...|||..|.|.|:||:..::.::.....:
  Fly   408 SVYGSSEELRERFLLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRRRMKKLSNPVGY 472

  Fly   484 LYTGIPMRKRWFLKHHLGRAWYWAFESGLTRKLALDADFEAVRVGYLSFLITEHVEAQPLNVDYF 548
            .:....:::.|.|:.|........||:||..||..|....||:.|:|.|..|:....:||.::..
  Fly   473 TWAVQVIKQNWVLEKHYNDHVQRFFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIEPLRLEDI 537

  Fly   549 VMPAIALAIGYILALLSFVIEMTA 572
            ||.|:.|..|:.||::.|::|:.|
  Fly   538 VMAAMVLGGGHALAVICFLVELFA 561



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460593
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C043
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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