DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48b and Ir11a

DIOPT Version :9

Sequence 1:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster


Alignment Length:662 Identity:124/662 - (18%)
Similarity:236/662 - (35%) Gaps:166/662 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VRTQGL-NDIII--------ELNQRLL------ISNNFLYCNQSDKLNEYEIKYLQHMPPISLMI 70
            ||.|.. .|:::        |||.|.|      ::.|::    ::::|...::.:....|..|  
  Fly    25 VRAQPTGRDVLLSRLGNQQNELNTRRLANASSYLTRNYI----ANRINTLVVREICVECPYEL-- 83

  Fly    71 FTSIESMNFTQVEYNLGADNKLFLIMGN-EEPPYDF-LHALNLHFQFAEYIIVI-DEPVD----- 127
             :..:.....|:..:|..:..:.|..|. ||..::: |..:|.|..|...:.:. ||.::     
  Fly    84 -SERQRQLVDQILASLAPELSVLLHKGTAEETTWEYTLFVVNDHTAFTGQVFIFPDELLEREFFC 147

  Fly   128 -------------------LKKSTKWLDFVNHL----WQQGYVQLLIYTSYDEKLYHKIIFPETV 169
                               :.||...:.|||.:    .:.|.|     .:|..||:.....|...
  Fly   148 IVVVSEIQSRQFVRQTVGSIVKSNLQMHFVNVVVVAQLEDGTV-----GTYSYKLFKANCTPGIT 207

  Fly   170 IEETLVEQYISIRG----SFNNLYGYPVRVAAYNNAPRSMLYVNRWGKHI--------------- 215
            :.:  :..:..|.|    |..:|  ||||.....:.|     .|....|:               
  Fly   208 VRQ--INHFDRITGKPQQSMPDL--YPVRNGHLGDCP-----FNVGAAHMPPHLIYKRHKDPPPA 263

  Fly   216 ---------FAGF---YMRFLRAFIDARNGSFVPVLTPSN--SPGN---CTLNLVNETVDVCADA 263
                     .||.   .::.|...:..|...::| ..||.  ..||   |...|.:.||.:....
  Fly   264 SNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMP-QEPSQIFGEGNVSGCFRQLADGTVSIAIGG 327

  Fly   264 LAANP---AAFSLTHGFRIASANVLVTHAKPLHSYRYLTAPFQWSVWACLVIYVLLVVNFLSFIG 325
            |:.:.   :.||.:..:..::..::|...:.|.....|..||:..:|..:::.:||.|  ||.. 
  Fly   328 LSGSDKRRSLFSKSTVYHQSNFVMVVRRDRYLGRLGPLILPFRGKLWGVIIVILLLAV--LSTC- 389

  Fly   326 WLRSGKWEFSKYLLEVFSSLLFSGFYLKEIRGRE--RYILFGVLFIAGFVYSTEYLGLLKSMLIS 388
            |||| :...|..:.::.:.::.:......:.|:.  ||:|...:.:. .|....|...|..:|..
  Fly   390 WLRS-RLGLSHPIEDLLTVIVGNPIPDHRLPGKGFLRYLLASWMLLT-LVLRCAYQARLFDVLRL 452

  Fly   389 EVFEKQIDTFEALVESNITLMVDPYDKILFAKYNMPEILSPIMELVSFETLLKHRNRFDQDYAYI 453
            ............|::.|.|::.:.|......:....:   |:.....||.:  .|...|:....|
  Fly   453 SRHRPLPKDLSGLIKDNYTMVANGYHDFYPLELTCRQ---PLDFSARFERV--QRAAPDERLTTI 512

  Fly   454 LFSDRMALYDYAQQFLKHPKLLRI-----PIDFSFLYTGIPMRKRWFLK---------------- 497
            .....:|.:::     |||.:.|:     ||....|....|  :|:||:                
  Fly   513 ALISNLAYWNH-----KHPNISRLTFVRQPIYMYHLVIYFP--RRFFLRPAIDRKIKQLLSAGVM 570

  Fly   498 HHLGRAWYWAFESGLTRKLALDADFEAVRVGYLSFLITEHVEAQPLNVDYFVMPAIALAIGYILA 562
            .|:.|. |..:|:  .||:|.:..           ::...:....:|..|.:...:     .:||
  Fly   571 AHIERR-YMQYEN--KRKVASNDP-----------VLLRRITKSIMNGAYRIHGLV-----IVLA 616

  Fly   563 LLSFVIEMTAWR 574
            ...|::|:.|.|
  Fly   617 TGMFILELLAGR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48bNP_610697.1 None
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 10/49 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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