DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir48b and Ir7c

DIOPT Version :9

Sequence 1:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001245572.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster


Alignment Length:606 Identity:118/606 - (19%)
Similarity:211/606 - (34%) Gaps:191/606 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PISLMIFTSIESMNFTQVEYN-LGAD---NKLFLIM--GNEEPPYDFLHALNLHFQFAEYIIVID 123
            ||::....|:.|....::..| ||:.   |..||::  |.|:.|   :.:|.:.|:....:.|::
  Fly    91 PIAIWFLDSLRSYFRLEMYLNQLGSPYKRNGFFLVIYTGLEDQP---MESLKIMFRRLLNMYVLN 152

  Fly   124 EPVDLKKSTKWLDFVNHLWQQGYVQLLIYTSYDEKLYH-------------------------KI 163
            ..|.|::             .|.|.|  ||.|....:|                         |.
  Fly   153 VNVFLQR-------------DGTVHL--YTYYPYGPHHCQSSLPVYYTAFQDLAAPANGFGLTKP 202

  Fly   164 IFPETVIEETLVEQYISIRGSFNNLYGYPVRVAAYNNAP-------------RSMLYVNRWGKHI 215
            :||.                ...|::|..:.||.:.:.|             ||:        |.
  Fly   203 LFPR----------------KLTNMHGCEMVVATFEHRPYVIIEDDPKTPGGRSI--------HG 243

  Fly   216 FAGFYMRFLRAFI----------DARNGSFVPVLTPSNSPGNCTLNLVNETVD-------VC--- 260
            ..|...|.|...:          |...|..:|       .||.| .::...||       ||   
  Fly   244 IEGLIFRSLAERMNFTIKLVEQKDKNRGEILP-------DGNFT-GILKMMVDGEVNLTFVCFMY 300

  Fly   261 ----ADALAANPAAFSLTHGFRIASANVLVTHAKPLHSYRYLTAPFQWSVWACLVI-----YVLL 316
                :|.:..:.:..|    |.|.   ::|.....:.....||.||::.:|:|:::     :||:
  Fly   301 SKARSDLMLPSTSYTS----FPIV---LVVPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLI 358

  Fly   317 VVNFLSFIGWLRS------------GKWEFSKYLLEVFSSLLFSGFYLKEIRGRERYILFGVLFI 369
            .:..::.:..||:            |.|          :|||.........|...||||. :..:
  Fly   359 CLLKITALPGLRNLVLGRRNRLPFMGMW----------ASLLGGLALYNPQRNFARYILV-MWLL 412

  Fly   370 AGFVYSTEYLGLLKSMLISEVFEKQIDTFEALVESNITLMVDPYDKILFAKYNMP-----EILSP 429
            ...:....|.|.|..:|........|.:...::..:....:.|..:.:| |.:||     .:|| 
  Fly   413 QTLILRAAYTGQLYLLLQDVEMRSPIKSLSEVLAKDYEFRILPALRTIF-KDSMPTTNFHAVLS- 475

  Fly   430 IMELVSFETLLKHRNRFDQDYAYILFSDRMALYDYAQ-------QFLKHPKLLRIPIDFSFLYTG 487
             :|    |:|.:.|:..|......|....:..:|:..       ..|..| |:..|:.|.     
  Fly   476 -LE----ESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNKRHLTVLPDP-LMTAPLTFY----- 529

  Fly   488 IPMRKRWFLKHHLGRAWYWAFESGLT---RKLALDADFEAVRVGYLSFLITEHVEAQPLNVDYFV 549
              ||...:.|..:.|.......||:.   ||:.:|      |:..:|  ...::|.:||::....
  Fly   530 --MRPHSYFKRRIDRLIMAMMSSGIVARYRKMYMD------RIKRVS--KRRNLEPKPLSIWRLS 584

  Fly   550 MPAIALAIGYILALLSFVIEM 570
            ...:..|..|::||:.|::|:
  Fly   585 GIFVCCAGLYLVALIVFILEI 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir48bNP_610697.1 None
Ir7cNP_001245572.1 Lig_chan-Glu_bd 225..287 CDD:214911 13/77 (17%)
Lig_chan 343..593 CDD:278489 55/283 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.