DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wal and ETFALPHA

DIOPT Version :9

Sequence 1:NP_476975.1 Gene:wal / 36252 FlyBaseID:FBgn0010516 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_175507.1 Gene:ETFALPHA / 841516 AraportID:AT1G50940 Length:363 Species:Arabidopsis thaliana


Alignment Length:343 Identity:169/343 - (49%)
Similarity:234/343 - (68%) Gaps:15/343 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASNTRNLMRSSI--LQRCKSTLVVAEHNNEVLNPITLNTISAAKKIG--GDVTVLVAGTKCG--- 60
            |||....:..||  |.||.|||::|||.:..:.|.|::|:.||..:|  ..:::|:||:...   
plant    17 ASNAPRSISISITSLSRCISTLILAEHESGTIKPQTVSTVVAANSLGESSSISLLLAGSGSSLQE 81

  Fly    61 PASEALSKVDGVTKVLVAENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAFGKNVLPRVAAK 125
            .||:|.|....|::||||::..|....||....||...:.|..::||||.:|:||||:||||||.
plant    82 AASQAASCHPSVSEVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAAL 146

  Fly   126 LDVSPISEIIDVKSDDTFVRTIYAGNAILTLKSKDAVK-VITVRSTNFPPAATSGGS----GAVE 185
            ||||||::::.:...|.|:|.||||||:.|::...|.. ::|:|||:||....:..|    ..|.
plant   147 LDVSPITDVVKILGSDQFIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKATVS 211

  Fly   186 QAPAGDF---ASSLSEFVSQELTKSDRPELAGAKVIVSGGRGLKSGDNFKLLYDLADKFGAAVGA 247
            |....:|   :.|.|.:|.:....::||:|..|:|:::|||.|||.:|||::..||:|.|.||||
plant   212 QIDLSNFEDDSVSKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFKMIEKLAEKLGGAVGA 276

  Fly   248 SRAAVDAGFVPNDLQIGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVAD 312
            :|||||||:||||||:||||||||||||:|.|:|||||||||:||||.|||:|||.:||||||||
plant   277 TRAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGIKDSKVIVAVNKDADAPIFQVAD 341

  Fly   313 IGIVADLFKAVPELTGKL 330
            .|:|.|||:.:|||..||
plant   342 YGLVGDLFEVIPELLEKL 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
walNP_476975.1 PLN00022 11..330 CDD:215032 164/333 (49%)
ETF_alpha 20..188 CDD:238848 71/177 (40%)
ETF_alpha 211..293 CDD:279150 57/81 (70%)
ETFALPHANP_175507.1 PLN00022 11..363 CDD:215032 169/343 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 127 1.000 Domainoid score I1765
eggNOG 1 0.900 - - E1_COG2025
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100
Inparanoid 1 1.050 304 1.000 Inparanoid score I773
OMA 1 1.010 - - QHG53915
OrthoDB 1 1.010 - - D1128607at2759
OrthoFinder 1 1.000 - - FOG0003377
OrthoInspector 1 1.000 - - oto2967
orthoMCL 1 0.900 - - OOG6_101090
Panther 1 1.100 - - LDO PTHR43153
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2274
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.