DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and HXT4

DIOPT Version :10

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_011960.2 Gene:HXT4 / 856492 SGDID:S000001134 Length:576 Species:Saccharomyces cerevisiae


Alignment Length:484 Identity:128/484 - (26%)
Similarity:225/484 - (46%) Gaps:69/484 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AALSVSLCSLVV---GFVSAY---TSPALVSMTDRTITSFEVTKDAGSW---------VGGIMPL 80
            |.::||:|.|:|   |||..:   |....|:.|| .|..|.:....|::         :..|..:
Yeast    67 AYVTVSICCLMVAFGGFVFGWDTGTISGFVAQTD-FIRRFGMKHHDGTYYLSKVRTGLIVSIFNI 130

  Fly    81 AALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNV-IMILCGRFLTGFCV-GIASLSL 143
            ....|||....|.:..||:..::...|.:|:..::...::|. .....||.::|..| |||.|| 
Yeast   131 GCAIGGIILAKLGDMYGRKMGLIVVVVIYIIGIIIQIASINKWYQYFIGRIISGLGVGGIAVLS- 194

  Fly   144 PVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAG-------SFMNWSMLAFLGAALPVPFLILM 201
            |:.:.|.....:||||......:..:||.:.|...       :.:.|.:...||.|..:..:..|
Yeast   195 PMLISEVSPKHIRGTLVSCYQLMITLGIFLGYCTNYGTKTYTNSVQWRVPLGLGFAWALFMIGGM 259

  Fly   202 IIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELK---ELMQSQADADRQATQNTCLELFKR 263
            ..:||:||:.|..|:.|.|::::. |..|.:..:|.:.   |::|:..:|::.|...:..|:|..
Yeast   260 TFVPESPRYLVEVGKIEEAKRSIA-LSNKVSADDPAVMAEVEVVQATVEAEKLAGNASWGEIFST 323

  Fly   264 NNLKPLSISLGLMF--FQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFMGIILI 326
            .......:.:|.|.  .||.:|.|...:|...:|...|.. ||..::|::|:|||.:||:||.|:
Yeast   324 KTKVFQRLIMGAMIQSLQQLTGDNYFFYYGTTVFTAVGLE-DSFETSIVLGIVNFASTFVGIFLV 387

  Fly   327 DRLG-RKILLY--VSDIAMIVTLSILGGFFYCKAHGPDVSHLGW----------------LPLTC 372
            :|.| |:.||:  .|..|.:|..:.:|           |:.| |                :..||
Yeast   388 ERYGRRRCLLWGAASMTACMVVFASVG-----------VTRL-WPNGKKNGSSKGAGNCMIVFTC 440

  Fly   373 FVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFW 437
            |  |:..|:..:.|||:::..|..|.:::....::..|.||...|::......::.|:..:..:.
Yeast   441 F--YLFCFATTWAPIPFVVNSETFPLRVKSKCMAIAQACNWIWGFLIGFFTPFISGAIDFYYGYV 503

  Fly   438 LFGAICIV-GLFFVIIFVPETRGKSLEEI 465
            ..|  |:| ..|:|..|||||:|.:|||:
Yeast   504 FMG--CLVFSYFYVFFFVPETKGLTLEEV 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 MFS_GLUT6_8_Class3_like 29..464 CDD:340916 126/481 (26%)
HXT4NP_011960.2 Sugar_tr 74..534 CDD:395036 125/477 (26%)

Return to query results.
Submit another query.