DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and VBA1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_013806.1 Gene:VBA1 / 855113 SGDID:S000004694 Length:562 Species:Saccharomyces cerevisiae


Alignment Length:505 Identity:100/505 - (19%)
Similarity:170/505 - (33%) Gaps:156/505 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LCSLVVG-FVSAYTSPALVSMTDRTITSF-EVTKDAGSWVGGIMPLAALAGGITGGPLIEYLGRR 99
            |.||.:| |:|:..|..:.::.:|....| |.:|.  .|:.....|...|.....|.|.:..||:
Yeast    39 LFSLWLGSFLSSLDSTIVANIMNRVAEEFSESSKK--QWIATSFLLTNTAFQPLYGKLSDITGRK 101

  Fly   100 STILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVG----IASLSLP---------VYLGETL 151
            |.:|.....|.:..||...|.||......|.:.|...|    |:|:::.         ||.|  .
Yeast   102 SALLTAQFFFGLGCLLTCFARNVTEFSIARAICGIGAGGLNAISSIAVSDICTARERGVYQG--Y 164

  Fly   152 QPEVRGTLGLLPTALGNIGILVCYVAGSFMNWSMLAFLGAALPVPFLILMIIIPETPRWFVNRGQ 216
            ...|.|...||...||.:.|       ..:.|.  |..|..:||..|..::.|            
Yeast   165 ANIVFGFGQLLGAPLGGVFI-------ETIGWR--ALFGIQVPVIMLCSVLAI------------ 208

  Fly   217 EERARKALKWLRGKEADVE----PELKELMQSQADADRQATQN-TCLELFKRNNLKPLSISLGLM 276
                         |..:::    |.:||         |...:| :.:::|  .:|..::...|::
Yeast   209 -------------KNINIKLFHVPPMKE---------RYTLKNLSRIDIF--GSLSLVATISGVL 249

  Fly   277 FF--QQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFMGIILIDRLGRKILLYVSD 339
            |.  .|.:.:...:|           ||.|.:  :.:.|..::|| ..|:..:.|.|...| .|.
Yeast   250 FLCSSQLNKLYLALF-----------TIGSFI--VFILVERYYAT-EKILPFELLTRSFCL-SSA 299

  Fly   340 IAMIVTLSILGGFFYCKAH-----------------GPDVS------HLGWLPLT-------C-- 372
            :.:|.:..:.|..|....:                 .|.:|      ..||:...       |  
Yeast   300 VTVISSFVVFGEIFRSPIYLQLLQNISVTKTGLFLIFPSISVAVGSLVTGWVLRNTKINLAHCAY 364

  Fly   373 ------FVIYILGFSLGFGPIPWLMMGEILPA-------------------KIRGPAASVVTAFN 412
                  .::.:||..||:     .::..:.|.                   |:....|||:.:|.
Yeast   365 QIIFGGMIMQLLGLGLGY-----FLLSHLNPDYTIYDMLESITFRSNSIWWKLIYVFASVLVSFG 424

  Fly   413 WFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSL 462
            :.|..|.|......||.....|.        :.|:|::...:....|.||
Yeast   425 YACLLVATLVSIVFTVEKSQQGT--------MTGVFYLWRSIGNVLGASL 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 100/505 (20%)
MFS 33..454 CDD:119392 97/495 (20%)
VBA1NP_013806.1 MFS_Azr1_MDR_like 42..469 CDD:341045 98/502 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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