DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and ITR2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_014538.2 Gene:ITR2 / 854050 SGDID:S000005463 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:477 Identity:125/477 - (26%)
Similarity:218/477 - (45%) Gaps:31/477 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DGLKANFTFSQVLAALSV------SLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVGG 76
            |......||:|.::...:      |:...:.|:.:.|.|.||:|: :|.:.:..:|......:..
Yeast    93 DDTSVIITFNQSISPFIITLTFVASISGFMFGYDTGYISSALISI-NRDLDNKVLTYGEKELITA 156

  Fly    77 IMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASL 141
            ...|.||...:..|...:..|||..::.:.:.|::.::|...|.....:..||.:.||.|||.||
Yeast   157 ATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSL 221

  Fly   142 SLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSFMN-----WSMLAFLGAALPVPFLILM 201
            ..|:::.|.....:||.|.::.:.....|.|:.|..|:.:|     |.:|..|.....|......
Yeast   222 ISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNHVKNGWRILVGLSLIPTVLQFSFF 286

  Fly   202 IIIPETPRWFVNRGQEERARKALK--WLRGKEADVEPELKEL--MQSQADADRQATQ--NTCLEL 260
            ..:|:|||::|.:|..:||:..||  ::..::..::.:::||  :..........|:  |...||
Yeast   287 CFLPDTPRYYVMKGDLKRAKMVLKRSYVNTEDEIIDQKVEELSSLNQSIPGKNPITKFWNMVKEL 351

  Fly   261 FK-RNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFMGII 324
            .. .:|.:.|.|..||...|||:|.|::::::..||:..|....|.:|.|:.| .||..|.:...
Yeast   352 HTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSG-TNFVFTLIAFF 415

  Fly   325 LIDRLGRKILLYVSDIAMIVTLSILGGFFY---CKAHGPDV-------SHLGWLPLTCFVIYILG 379
            .||::||:.:|.:....|.|.|.|....|:   .|.:|.|.       |..|.:.:...::|...
Yeast   416 CIDKIGRRYILLIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAF 480

  Fly   380 FSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICI 444
            ::||.|.:|| ...|:.|..:||...|..||.||..:.|:..||..:...:...|.|..|..:..
Yeast   481 YALGIGTVPW-QQSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQNITPTGTFSFFAGVAC 544

  Fly   445 VGLFFVIIFVPETRGKSLEEIE 466
            :...|.....||..|..|||::
Yeast   545 LSTIFCYFCYPELSGLELEEVQ 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 121/464 (26%)
MFS 33..454 CDD:119392 115/448 (26%)
ITR2NP_014538.2 MFS_HMIT_like 115..556 CDD:340918 115/443 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342407
Domainoid 1 1.000 166 1.000 Domainoid score I806
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9181
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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