DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and GEX2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_013032.1 Gene:GEX2 / 853981 SGDID:S000001814 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:555 Identity:120/555 - (21%)
Similarity:192/555 - (34%) Gaps:160/555 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LKANFTFSQVLAALSVSLCSLVVGFV------------SAYTSPALVSMTDRTITSFEVTKDAGS 72
            ||.|...|....:|...:..:...||            |.||..|..|.::.::.         |
Yeast    43 LKENEIMSAQFDSLKYKILLISTAFVCGFGISLDYTLRSTYTGYATNSYSEHSLL---------S 98

  Fly    73 WVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGR--FLTGFC 135
            .|..|..:.::...:....|.::.||....|...:.:|:.:::.:.|..:.|...|.  :..|: 
Yeast    99 TVQVINAVVSVGSQVVYSRLSDHFGRLRLFLVATIFYIMGTIIQSQATRLTMYAAGSVFYNCGY- 162

  Fly   136 VGIASLSLPVYLGE-------------TLQPEVRGTLGLLPTALGNIGILVCYVAGSFMNWS--- 184
            || .:|.|.:.|.:             :..|.:     ::|...|||    ...|....|||   
Yeast   163 VG-TNLLLTLILSDFSSLKWRMFYQYASYWPYI-----IIPWISGNI----ITAANPQKNWSWNI 217

  Fly   185 -MLAFLG--AALPVPFLILMIII--PETPRWFVNRGQEERARKA-----------LKWLRGKEAD 233
             |.||:.  :.||:.||||.:..  .:|..|   |..:|:|||.           |.|    :.|
Yeast   218 AMWAFIYPLSTLPIIFLILYMKYKSSKTAEW---RSLKEQARKERTGGLFENLVFLFW----KLD 275

  Fly   234 VEPEL----------------KELMQSQADADRQAT--QNTCL--------ELFKRNNLKPLSI- 271
            :...|                .|..|...::...||  ...||        ..|.::.|.|..: 
Yeast   276 IVGILLITVSLGCILVPLTLANETSQKWHNSKIIATLVSGGCLFFIFLYWEAKFAKSPLLPFKLL 340

  Fly   272 -------SLGLMFFQQFS-GINAVIFYTVQIFKDAGSTIDSNLSTI-IVGVVNFFAT----FMGI 323
                   .||:.||..|: .|:....|.|.:.    |..:|:.|.. ||.:.:|.|.    |..:
Yeast   341 SDRGIWAPLGVTFFNFFTFFISCDYLYPVLLV----SMKESSTSAARIVNLPDFVAATASPFYSL 401

  Fly   324 ILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPIP 388
            ::...  ||:.|.|  |.......:..|.|| |..|...||.|.:..:    .|:|.|   |.:.
Yeast   402 LVAKT--RKLKLSV--IGGCAAWMVCMGLFY-KYRGGSGSHEGVIAAS----VIMGLS---GLLC 454

  Fly   389 WLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGA--HGAFWLFGAICIVGLFFVI 451
            ...:..||.|.......:|:|...:        ||..|..|:||  .||.|              
Yeast   455 SNSVIVILQAMTTHSRMAVITGIQY--------TFSKLGAAIGASVSGAIW-------------- 497

  Fly   452 IFVPETRGKSLEEIERKMMGRVPMSSVVNIKPFPF 486
               .:|....|    .|.:|...::.:....|:.|
Yeast   498 ---TQTMPNQL----YKNLGNDTLAEIAYASPYTF 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 112/523 (21%)
MFS 33..454 CDD:119392 110/508 (22%)
GEX2NP_013032.1 MFS_ARN_like 59..571 CDD:340880 115/539 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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