DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and MPH3

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_012694.1 Gene:MPH3 / 853625 SGDID:S000003921 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:573 Identity:134/573 - (23%)
Similarity:223/573 - (38%) Gaps:139/573 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HVSFS----VPADGLK--------------------------ANFTFSQVLA-ALSVSLCSLVVG 43
            ||.||    .|:|..|                          |..|:.:..| :|.||...::.|
Yeast    48 HVEFSPDTRAPSDSNKVITEIFDATEDAKEADESERGMPLATALNTYPKAAAWSLLVSTTLIMEG 112

  Fly    44 FVSA-----YTSPALV----SMTDRTITSFEVTKDAGSWVGGIMPLAALAGGITG----GPLIEY 95
            :.:|     |..|...    |..|:| ..:|:   :.||..| :.|..:||.|.|    ||.::.
Yeast   113 YDTAILGAFYALPIFQRKFGSQNDKT-GEWEI---SASWQIG-LTLCYMAGEIVGLQLTGPSVDL 172

  Fly    96 LGRRSTILATAVPFIVSSLLIACAVNVI-MILCGRFLTGFCVG------------IASLSLPVYL 147
            :|.|.|:: .|:.|:.:...|....|.: ||..|:.|.|...|            |..|:|..||
Yeast   173 VGNRYTLI-IALFFLAAFTFILYFCNSLGMIAVGQALCGMPWGCFQCLTVSYASEICPLALRYYL 236

  Fly   148 GETLQPEVRGTLGLLPTALGNIGILVCYVAG-----------------SFMNWSMLAFLGAALPV 195
                            |...|:    |::.|                 |.:.:.:...|...|||
Yeast   237 ----------------TTYSNL----CWLFGQLFAAGIMKNSQKKYADSELGYKLPFALQWILPV 281

  Fly   196 PFLILMIIIPETPRWFVNRGQEERARKAL-KWLRGKEADVEPELKELMQSQAD------------ 247
            |..:.:...||:|.|.|.:|:.:.||::| :.|.||    .||.:.|:..:.|            
Yeast   282 PLALGIFFAPESPWWLVKKGRFDEARRSLRRTLSGK----GPEKEILVTLEVDKIKVTIDKEKRL 342

  Fly   248 ADRQATQNTCLELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAG-STIDSNLSTIIV 311
            ..::.:.:.|.|  .:.|.:...|:. |.:..|.:..:.:|.|:...::.|| ||..|...:||.
Yeast   343 TSKEGSYSDCFE--DKINRRRTRITC-LCWAGQATCGSILIGYSTYFYEKAGVSTEMSFTFSIIQ 404

  Fly   312 GVVNFFATFMGIILIDRLGRKILLYVSDIA-MIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVI 375
            ..:...|||:........|| ..||...:| ..:...|:||......||   |.:|...|...|.
Yeast   405 YCLGICATFLSWWASKYFGR-YDLYAFGLAFQTIVFFIIGGLGCSSTHG---SKMGSGSLLMAVA 465

  Fly   376 YILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWF------CTFVVTKTFQDLTVAMGA-H 433
            :.  ::||..|:.:.::.|:..:::|  ..:::.|.|.:      |:.::...........|| .
Yeast   466 FF--YNLGIAPVVFCLVSEMPSSRLR--TKTIILARNTYNVVSIICSVLILYQLNSKKWNWGAKS 526

  Fly   434 GAFWLFGAICIVGLFFVIIFVPETRGKSLEEIERKMMGRVPMSSVVNIKPFPF 486
            |.||  |.:|...|.:.::.:|||.||:..||.......|......:.|..||
Yeast   527 GFFW--GVLCFCTLIWAVVDLPETAGKTFVEINELFKLGVSARKFKSTKVDPF 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 121/501 (24%)
MFS 33..454 CDD:119392 113/485 (23%)
MPH3NP_012694.1 SP 72..556 CDD:273317 121/526 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342765
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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