DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and HXT9

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_012316.1 Gene:HXT9 / 853236 SGDID:S000003755 Length:567 Species:Saccharomyces cerevisiae


Alignment Length:496 Identity:122/496 - (24%)
Similarity:212/496 - (42%) Gaps:86/496 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LCSLVV--GFVSAY---TSPALVSMTDRTITSFEVTKDAGSW---------VGGIMPLAALAGGI 87
            ||.::.  ||:..:   |....|:::| .|..|....|.|::         :..|..:....|||
Yeast    64 LCLMIAFGGFIFGWDTGTISGFVNLSD-FIRRFGQKNDKGTYYLSKVRMGLIVSIFNIGCAIGGI 127

  Fly    88 TGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNV-IMILCGRFLTGFCV-GIASLSLPVYLGET 150
            ....:.:..|||..::.....::|..|:...::|. .....||.::|..| |||.|| |:.:.|.
Yeast   128 VLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIGRIISGLGVGGIAVLS-PMLISEV 191

  Fly   151 LQPEVRGTLGLLPTALGNIGILVCYVA-----------------GSFMNWSMLAFLGAALPVPFL 198
            ...::||||..|...:..:||.:.|..                 |....|:.....|        
Yeast   192 APKQIRGTLVQLYQLMCTMGIFLGYCTNYGTKNYHNATQWRVGLGLCFAWTTFMVSG-------- 248

  Fly   199 ILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELK----------ELMQSQADADRQAT 253
              |:.:||:||:.:..|::|.|:::|........| :|.|.          ||.:...:|.....
Yeast   249 --MMFVPESPRYLIEVGKDEEAKRSLSKSNKVSVD-DPALLAEYDTIKAGIELEKLAGNASWSEL 310

  Fly   254 QNTCLELFKRNNLKPLSISLGLMF--FQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNF 316
            .:|..::|:|       :.:|:|.  .||.:|.|...:|...|||..|.. ||..::||:|||||
Yeast   311 LSTKTKVFQR-------VLMGVMIQSLQQLTGDNYFFYYGTTIFKSVGLK-DSFQTSIIIGVVNF 367

  Fly   317 FATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSH-------LGWLPLTCFV 374
            |::|:.:..|:|.||:..|.....:|:...::.......|......||       .|    .|.:
Yeast   368 FSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQGAG----NCMI 428

  Fly   375 IYILGFSLGFGPIPW-----LMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHG 434
            ::.:.|...|. ..|     :::.|..|.:::....::.||.||...|:::.....:|.|:..:.
Yeast   429 VFTMFFIFSFA-TTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWGFLISFFTPFITGAINFYY 492

  Fly   435 AFWLFGAICIV-GLFFVIIFVPETRGKSLEEIERKMMGRVP 474
            .:...|  |:| ..|:|..|||||:|.:|||:....:..||
Yeast   493 GYVFLG--CLVFAYFYVFFFVPETKGLTLEEVNTMWLEGVP 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 120/487 (25%)
MFS 33..454 CDD:119392 111/474 (23%)
HXT9NP_012316.1 Sugar_tr 64..526 CDD:395036 120/489 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342770
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9181
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
65.640

Return to query results.
Submit another query.