DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and ITR1

DIOPT Version :10

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:490 Identity:135/490 - (27%)
Similarity:228/490 - (46%) Gaps:57/490 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DGLKANFTFSQVLAALSV------SLCSLVVGFVSAYTSPALVSM---TDRTITSF---EVTKDA 70
            |......||:|.|:...:      |:...:.|:.:.|.|.||:|:   .|..:.::   |:...|
Yeast    70 DDTSVMITFNQSLSPFIITLTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAA 134

  Fly    71 GSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFC 135
            .|       |.||...|..|...:..||:..::.:.:.|::.::|...|.....:..||.:.||.
Yeast   135 TS-------LGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFG 192

  Fly   136 VGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSFMN-----WSMLAFLGAALPV 195
            |||.||..|:::.|.....:||.|.::.:.....|.||.|..|:.:|     |.:|  :|.:| :
Yeast   193 VGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRIL--VGLSL-I 254

  Fly   196 PFLI---LMIIIPETPRWFVNRGQEERARKALK--WLRGKEADVEPELKELMQ-SQADADRQATQ 254
            |..:   .:..:|:|||::|.:|...||.:.||  :....|..:|.:::||:. :|:...:...:
Yeast   255 PTAVQFTCLCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPE 319

  Fly   255 ---NTCLELFK-RNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVN 315
               ||..||.. .:||:.|.|..||...|||:|.|::::::..||:..|....|.:|.|:.| .|
Yeast   320 KVWNTIKELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSG-TN 383

  Fly   316 FFATFMGIILIDRLGRKILLYVSDIAM---IVTLSILGGFFYCKAHG-------PDVSHLGWLPL 370
            |..|.:....||::||:.:|.:....|   :|..||...|...|..|       ...|..|.:.:
Yeast   384 FIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVII 448

  Fly   371 TCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTF----QDLTVAMG 431
            ...:::...::||.|.:|| ...|:.|..:||...|..||.||..:.|:..||    |::|.|  
Yeast   449 VFIIVFAAFYALGIGTVPW-QQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPA-- 510

  Fly   432 AHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEIE 466
              |.|..|..:..:...|.....||..|..|||::
Yeast   511 --GTFAFFAGLSCLSTIFCYFCYPELSGLELEEVQ 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 MFS_GLUT6_8_Class3_like 29..464 CDD:340916 129/475 (27%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 124/456 (27%)

Return to query results.
Submit another query.