DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and RGT2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_010143.1 Gene:RGT2 / 851417 SGDID:S000002297 Length:763 Species:Saccharomyces cerevisiae


Alignment Length:505 Identity:136/505 - (26%)
Similarity:241/505 - (47%) Gaps:78/505 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTIT--------SFEVTKDAGSWVGGIMPLAAL 83
            |.|::.| |.:...|.||:..|.:..:.|:||....        |:..|......| ..:.|...
Yeast    95 SNVMSVL-VGIFVAVGGFLFGYDTGLINSITDMPYVKTYIAPNHSYFTTSQIAILV-SFLSLGTF 157

  Fly    84 AGGITGGPLIEYLGRRSTIL-ATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYL 147
            .|.:....:.:..||:.||: :|||.|.:.:.|...:..:::::.||.::|..:||.|..:|:|.
Yeast   158 FGALIAPYISDSYGRKPTIMFSTAVIFSIGNSLQVASGGLVLLIVGRVISGIGIGIISAVVPLYQ 222

  Fly   148 GETLQPEVRG----------TLGLLPTALGNIG-------------ILVCYVAGSFMNWSMLAFL 189
            .|..|..:||          |:|||.::..:.|             |.:.||      ||.:..:
Yeast   223 AEAAQKNLRGAIISSYQWAITIGLLVSSAVSQGTHSKNGPSSYRIPIGLQYV------WSSILAV 281

  Fly   190 GAALPVPFLILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQAT- 253
            |          ||.:||:||::|.:.:..:|.|:|.:|||...:....|:||::.:|..|.:|: 
Yeast   282 G----------MIFLPESPRYYVLKDELNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASF 336

  Fly   254 -QNTCLELFKRNNLKPLSI-----SLGLMFFQQFSGINAVIFYTVQIFKDAGSTID-SNLSTIIV 311
             .:|.|:.||.:..:|..|     .:.:..|||.||||.:.:|.|..|.:.|  :| |.|.:.|.
Yeast   337 GPSTLLDCFKTSENRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTG--VDNSYLVSFIS 399

  Fly   312 GVVNFFATFMGIILIDRLGRKILLYVSDIAMIV---TLSILGGFFYCKAHGPDVSHLGWLPLTCF 373
            ..||...:..|:.|:||:||:.:|....:.|.:   .::|:|     .:.|..|. ...:.:...
Yeast   400 YAVNVAFSIPGMYLVDRIGRRPVLLAGGVIMAIANLVIAIVG-----VSEGKTVV-ASKIMIAFI 458

  Fly   374 VIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTF---VVTKTFQDL---TVAMGA 432
            .::|..||..:|.:.|::..|:.|..:|....::..|.||...|   ::|....|:   |.:||.
Yeast   459 CLFIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMGP 523

  Fly   433 HGAFWLFGAICIVGLFFVIIFVPETRGKSLEEIERKMMGRVPMSSVVNIK 482
            . .|:::|.:.:|.:..|...|.||||.:||||: ::..:.| :||::.|
Yeast   524 K-IFFIWGGLNVVAVIVVYFAVYETRGLTLEEID-ELFRKAP-NSVISSK 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 130/484 (27%)
MFS 33..454 CDD:119392 121/469 (26%)
RGT2NP_010143.1 SP 76..555 CDD:273317 130/486 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342616
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9181
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R490
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
76.670

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