DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and SNF3

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_010087.1 Gene:SNF3 / 851333 SGDID:S000002353 Length:884 Species:Saccharomyces cerevisiae


Alignment Length:501 Identity:121/501 - (24%)
Similarity:223/501 - (44%) Gaps:69/501 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DTHVSFSVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGS 72
            |..:.||.|...       ..::.::.|.:...|.||:..|.:..:.|:|........|..:..|
Yeast    80 DNSILFSEPPQK-------QSMMMSICVGVFVAVGGFLFGYDTGLINSITSMNYVKSHVAPNHDS 137

  Fly    73 WVG-------GIMPLAALAGGITGGPLIEYLGRRSTIL-ATAVPFIVSSLLIACAVNVIMILCGR 129
            :..       ..:.|....|.:|...:.:..||:.||: :|...|.:.:.|...|..:.:::.||
Yeast   138 FTAQQMSILVSFLSLGTFFGALTAPFISDSYGRKPTIIFSTIFIFSIGNSLQVGAGGITLLIVGR 202

  Fly   130 FLTGFCVGIASLSLPVYLGETLQPEVRG----------TLGLLPTALGNIGILVCYVAGSF---- 180
            .::|..:|..|..:|:|..|.....:||          |.|||.::..:.|......|.|:    
Yeast   203 VISGIGIGAISAVVPLYQAEATHKSLRGAIISTYQWAITWGLLVSSAVSQGTHARNDASSYRIPI 267

  Fly   181 ---MNWSMLAFLGAALPVPFLILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELM 242
               ..||....:|          |..:||:||::|.:.:.:.|.|:|.:|||........|:||:
Yeast   268 GLQYVWSSFLAIG----------MFFLPESPRYYVLKDKLDEAAKSLSFLRGVPVHDSGLLEELV 322

  Fly   243 QSQADADRQAT--QNTCLELFKRNNLKP-----LSISLGLMFFQQFSGINAVIFYTVQIFKDAGS 300
            :.:|..|.:|:  .:..::.|..:..:|     :...:.|..||||||||.:.:|.|..|...|.
Yeast   323 EIKATYDYEASFGSSNFIDCFISSKSRPKQTLRMFTGIALQAFQQFSGINFIFYYGVNFFNKTGV 387

  Fly   301 TIDSNLSTIIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVT---LSILGGFFYCKAHGPDV 362
            : :|.|.:.|...||......|:..::..||:.:|.|..:.|.:.   ::|:|    |.......
Yeast   388 S-NSYLVSFITYAVNVVFNVPGLFFVEFFGRRKVLVVGGVIMTIANFIVAIVG----CSLKTVAA 447

  Fly   363 SHLGWLPLTCFV-IYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFV---VTKTF 423
            :.:    :..|: ::|..||..:|.:.|::..|:.|..:|....::..|.||...|:   :|...
Yeast   448 AKV----MIAFICLFIAAFSATWGGVVWVISAELYPLGVRSKCTAICAAANWLVNFICALITPYI 508

  Fly   424 QDL---TVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEIE 466
            .|.   |.::||. .|:::|::..:|:..|.:.|.||:|.:||||:
Yeast   509 VDTGSHTSSLGAK-IFFIWGSLNAMGVIVVYLTVYETKGLTLEEID 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 117/478 (24%)
MFS 33..454 CDD:119392 109/462 (24%)
SNF3NP_010087.1 MFS_HXT 99..556 CDD:340914 117/475 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342618
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13432
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
65.640

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