DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and GAL2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_013182.1 Gene:GAL2 / 850770 SGDID:S000004071 Length:574 Species:Saccharomyces cerevisiae


Alignment Length:531 Identity:134/531 - (25%)
Similarity:223/531 - (41%) Gaps:99/531 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFSVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVT--------- 67
            |.|||.:..|.  ..|:.:....:.||....||:..:.:        .||:.|.|.         
Yeast    53 SQSVPIEIPKK--PMSEYVTVSLLCLCVAFGGFMFGWDT--------GTISGFVVQTDFLRRFGM 107

  Fly    68 --KDAGSWVG--------GIMPLAALAGGI---TGGPLIEYLGRRSTILATAVPFIVSSLLIACA 119
              ||...::.        .|..:....|||   .||   :..||:..:......:||..::...:
Yeast   108 KHKDGTHYLSNVRTGLIVAIFNIGCAFGGIILSKGG---DMYGRKKGLSIVVSVYIVGIIIQIAS 169

  Fly   120 VNV-IMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRGTL----GLLPTALGNIGILVCYVAGS 179
            :|. .....||.::|..||..::..|:.:.|.....:||||    .|:.||...:|....|...|
Yeast   170 INKWYQYFIGRIISGLGVGGIAVLCPMLISEIAPKHLRGTLVSCYQLMITAGIFLGYCTNYGTKS 234

  Fly   180 FMN-------------WSMLAFLGAALPVPFLILMIIIPETPRWFVNRGQEERARKALKWLRGKE 231
            :.|             || |..:||         :.::||:||:.....:.|.|::::    .|.
Yeast   235 YSNSVQWRVPLGLCFAWS-LFMIGA---------LTLVPESPRYLCEVNKVEDAKRSI----AKS 285

  Fly   232 ADVEPE------LKELMQSQADADRQATQNTCLELF--KRNNLKPLSISLGLMFFQQFSGINAVI 288
            ..|.||      ..:|:.:..:|::.|...:..|||  |....:.|.:.:.:..|||.:|.|...
Yeast   286 NKVSPEDPAVQAELDLIMAGIEAEKLAGNASWGELFSTKTKVFQRLLMGVFVQMFQQLTGNNYFF 350

  Fly   289 FYTVQIFKDAGSTIDSNLST-IIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILG-- 350
            :|...|||..|  :|.:..| |::|||||.:||..:..::.||.:..|.:....|:..:.|..  
Yeast   351 YYGTVIFKSVG--LDDSFETSIVIGVVNFASTFFSLWTVENLGHRKCLLLGAATMMACMVIYASV 413

  Fly   351 GFFYCKAHG---PDVSHLG--WLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTA 410
            |......||   |.....|  .:..|||  ||..::..:.|:.|::..|..|.:::....::.:|
Yeast   414 GVTRLYPHGKSQPSSKGAGNCMIVFTCF--YIFCYATTWAPVAWVITAESFPLRVKSKCMALASA 476

  Fly   411 FNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFF-VIIFVPETRGKSLEEIER------- 467
            .||...|::......:|.|:..:..:...|  |:|.:|| |..|||||:|.|||||:.       
Yeast   477 SNWVWGFLIAFFTPFITSAINFYYGYVFMG--CLVAMFFYVFFFVPETKGLSLEEIQELWEEGVL 539

  Fly   468 --KMMGRVPMS 476
              |..|.:|.|
Yeast   540 PWKSEGWIPSS 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 124/492 (25%)
MFS 33..454 CDD:119392 113/477 (24%)
GAL2NP_013182.1 Sugar_tr 74..534 CDD:278511 124/490 (25%)
MFS 75..518 CDD:119392 113/473 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342773
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13432
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
65.640

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