DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and TMT1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001319055.1 Gene:TMT1 / 838676 AraportID:AT1G20840 Length:734 Species:Arabidopsis thaliana


Alignment Length:737 Identity:151/737 - (20%)
Similarity:246/737 - (33%) Gaps:328/737 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAG--SWVGGIMPLAALAGG--IT-- 88
            |.||:.::.:.:.|:.:|..:.|:|          .:.||..  :.|.|::...:|.|.  ||  
plant     6 LVALAATIGNFLQGWDNATIAGAMV----------YINKDLNLPTSVQGLVVAMSLIGATVITTC 60

  Fly    89 GGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQP 153
            .||:.::||||..::.::|.:.|..|::..:.||.::...|.|.||..|:|...:|||:.||..|
plant    61 SGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNVYVLCFARLLNGFGAGLAVTLVPVYISETAPP 125

  Fly   154 EVRGTLGLLPTALGNIGILVCYVAGSFMNW----SMLAFLGAALPVPFLILMII----IPETPRW 210
            |:||.|..||..||:.|:.:.|.....|:.    |..|.|| .|.:|.|:.:.:    :||:|||
plant   126 EIRGQLNTLPQFLGSGGMFLSYCMVFTMSLSDSPSWRAMLG-VLSIPSLLYLFLTVFYLPESPRW 189

  Fly   211 FVNRGQEERARKALKWLRGKEADVEPELKELMQ--------------------------SQADAD 249
            .|::|:.:.|::.|:.|.|:| ||..|:..|::                          ...|.|
plant   190 LVSKGRMDEAKRVLQQLCGRE-DVTDEMALLVEGLDIGGEKTMEDLLVTLEDHEGDDTLETVDED 253

  Fly   250 RQ-----------------ATQNTCLEL------------------------------------- 260
            .|                 ..||:.|.|                                     
plant   254 GQMRLYGTHENQSYLARPVPEQNSSLGLRSRHGSLANQSMILKDPLVNLFGSLHEKMPEAGGNTR 318

  Fly   261 ----------------------------------------------------------------- 260
                                                                             
plant   319 SGIFPHFGSMFSTTADAPHGKPAHWEKDIESHYNKDNDDYATDDGAGDDDDSDNDLRSPLMSRQT 383

  Fly   261 --------------------------------------------------FKRNNLK-------- 267
                                                              :||..||        
plant   384 TSMDKDMIPHPTSGSTLSMRRHSTLMQGNGESSMGIGGGWHMGYRYENDEYKRYYLKEDGAESRR 448

  Fly   268 -------------------------------------------------------------PLSI 271
                                                                         .|.:
plant   449 GSIISIPGGPDGGGSYIHASALVSRSVLGPKSVHGSAMVPPEKIAASGPLWSALLEPGVKRALVV 513

  Fly   272 SLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFM--------------- 321
            .:|:...|||||||.|::||.||.:.||  :|..||::  |:.:..|:|:               
plant   514 GVGIQILQQFSGINGVLYYTPQILERAG--VDILLSSL--GLSSISASFLISGLTTLLMLPAIVV 574

  Fly   322 GIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHL--------GWLPLTCFVIYIL 378
            .:.|:|..||:.||..:...:||:|.:|           .:|.|        ..|...|.|:|..
plant   575 AMRLMDVSGRRSLLLWTIPVLIVSLVVL-----------VISELIHISKVVNAALSTGCVVLYFC 628

  Fly   379 GFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAIC 443
            .|.:|:||||.::..||.|.::||...::.....|....:||.:...|..::|..|.|.::.|:|
plant   629 FFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVC 693

  Fly   444 IVGLFFVIIFVPETRGKSLEEI 465
            ::...||.:.||||:|..||.|
plant   694 VISWIFVYMKVPETKGMPLEVI 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 150/736 (20%)
MFS 33..454 CDD:119392 141/721 (20%)
TMT1NP_001319055.1 MFS 10..>208 CDD:421695 63/208 (30%)
MFS <509..706 CDD:421695 61/211 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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