DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and AT5G18840

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_568367.1 Gene:AT5G18840 / 832002 AraportID:AT5G18840 Length:482 Species:Arabidopsis thaliana


Alignment Length:458 Identity:148/458 - (32%)
Similarity:232/458 - (50%) Gaps:34/458 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NFTFSQVLAALSVSLC-SLVVGFVSAYTSPALVSM-TDRTITSFEVTKDAGSWVGGIMPLAALAG 85
            |.::..||.:..|::| |...|....|::|...|: .|..::..|.     |..|.|:.:.|:.|
plant    38 NESYLMVLFSTFVAVCGSFEFGSCVGYSAPTQSSIRQDLNLSLAEF-----SMFGSILTIGAMLG 97

  Fly    86 GITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGET 150
            .:..|.:.::.||:..:..:|...|...|.:......:::..|||.||:.:|:.|..:|||:.|.
plant    98 AVMSGKISDFSGRKGAMRTSACFCITGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEI 162

  Fly   151 LQPEVRGTLGLLPTALGNIGILVCYVAGSFMNWSMLAFLGAALPVPFLILMIIIPETPRWFVNRG 215
            ....:||.|..|...:..||..|.::.||.::|..||..|.|..:..|..:..|||:|||....|
plant   163 SPKNLRGGLTTLNQLMIVIGSSVSFLIGSLISWKTLALTGLAPCIVLLFGLCFIPESPRWLAKAG 227

  Fly   216 QEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLELFKRNNLKPL-------SISL 273
            .|:..|.||:.||||:||:        .::||..:.:.|  .||:..:..::.|       |:.:
plant   228 HEKEFRVALQKLRGKDADI--------TNEADGIQVSIQ--ALEILPKARIQDLVSKKYGRSVII 282

  Fly   274 G--LMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFMGIILIDRLGRKILLY 336
            |  ||.||||.|||.:.||..:.|..||.| ...|.||.:..|....|.:|.||||:.||:.|:.
plant   283 GVSLMVFQQFVGINGIGFYASETFVKAGFT-SGKLGTIAIACVQVPITVLGTILIDKSGRRPLIM 346

  Fly   337 VSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTC---FVIYILGFSLGFGPIPWLMMGEILPA 398
            :|...:.:...:.|..|..|...   ..|.|:|...   .:||:..||:|.||:||::|.||.|.
plant   347 ISAGGIFLGCILTGTSFLLKGQS---LLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPI 408

  Fly   399 KIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSLE 463
            .::|.|.|:|...||...:.|:.||..| ::..:.|.|:|:.|.....:.||...||||:||:||
plant   409 NVKGIAGSLVVLVNWSGAWAVSYTFNFL-MSWSSPGTFYLYSAFAAATIIFVAKMVPETKGKTLE 472

  Fly   464 EIE 466
            ||:
plant   473 EIQ 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 145/450 (32%)
MFS 33..454 CDD:119392 135/434 (31%)
AT5G18840NP_568367.1 MFS_GLUT6_8_Class3_like 45..473 CDD:340916 143/447 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 292 1.000 Domainoid score I356
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I822
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.930

Return to query results.
Submit another query.