DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and AT5G17010

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001318578.1 Gene:AT5G17010 / 831564 AraportID:AT5G17010 Length:503 Species:Arabidopsis thaliana


Alignment Length:494 Identity:149/494 - (30%)
Similarity:243/494 - (49%) Gaps:56/494 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DTHV--SFSVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFE----V 66
            :.||  ::||.|          .:|..|..:|..|:.|:....||.|.:|:...:::...    .
plant    35 ENHVPENYSVVA----------AILPFLFPALGGLLYGYEIGATSCATISLQSPSLSGISWYNLS 89

  Fly    67 TKDAGSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFL 131
            :.|.|....|.: ..||.|.|....:.:.:|||..::..|:.::|.:|:.|.|....:::.||.:
plant    90 SVDVGLVTSGSL-YGALFGSIVAFTIADVIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVI 153

  Fly   132 TGFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSF-----MNWSMLAFLGA 191
            .|..||:|..:.|:|:.||....:||.|..|......:|::..|..||.     ..|..:    .
plant   154 YGVSVGLAMHAAPMYIAETAPSPIRGQLVSLKEFFIVLGMVGGYGIGSLTVNVHSGWRYM----Y 214

  Fly   192 ALPVPFLILMII----IPETPRWFVNR---------GQEERARKALKWLRGKEADVEPELKELMQ 243
            |..||..::|.|    :|.:|||.:.|         .|.|.|.|:|..||| .|.|:...:::.:
plant   215 ATSVPLAVIMGIGMWWLPASPRWLLLRVIQGKGNVENQREAAIKSLCCLRG-PAFVDSAAEQVNE 278

  Fly   244 SQAD-----ADRQATQNTCLELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTI- 302
            ..|:     .|::.|..   |||:...||.|.|..||:.|||.:|..:|::|...|.:.||.:. 
plant   279 ILAELTFVGEDKEVTFG---ELFQGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAA 340

  Fly   303 -DSNLSTIIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLG 366
             |:...:|::|::....|.:.:::||||||:.||......|:|:|.:||.::...:..|.|:   
plant   341 GDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFLLGSYYLFFSASPVVA--- 402

  Fly   367 WLPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMG 431
               :...::|:..:.|.||||.|||:.||.|.|:||...|:....|:....:||..|..|...:|
plant   403 ---VVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLG 464

  Fly   432 AHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEIERKMM 470
            |...|..||.||::.|.|:...||||:|.:|||||.|.:
plant   465 AGILFCGFGVICVLSLVFIFFIVPETKGLTLEEIEAKCL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 141/464 (30%)
MFS 33..454 CDD:119392 132/449 (29%)
AT5G17010NP_001318578.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.780

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