DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and TMT2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:728 Identity:149/728 - (20%)
Similarity:245/728 - (33%) Gaps:301/728 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLAALAGG--IT--G 89
            ||.|::.::.:|:.|:.:|..:.|::.:..      |...::...|.|::...:|.|.  ||  .
plant     5 VLVAIAAAVGNLLQGWDNATIAGAVLYIKK------EFNLESNPSVEGLIVAMSLIGATLITTCS 63

  Fly    90 GPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPE 154
            |.:.::||||..::.:::.:.|.||::..:.||.::|.||.|.||.||:....:|:|:.||..||
plant    64 GGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISETAPPE 128

  Fly   155 VRGTLGLLPTALGNIGILV--CYVAG-SFM---NWS-MLAFLGAALPVPFLILMIIIPETPRWFV 212
            :||.|..||...|:.|:.:  |.|.| |.|   :|. ||..|.....|.|.:.:..:||:|||.|
plant   129 IRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWRLMLGVLFIPSLVFFFLTVFFLPESPRWLV 193

  Fly   213 NRGQEERARKALKWLRGKEADVEPELKELMQS--------------------------QADAD-- 249
            ::|:...|::.|:.|||:| ||..|:..|::.                          ..|.|  
plant   194 SKGRMLEAKRVLQRLRGRE-DVSGEMALLVEGLGIGGETTIEEYIIGPADEVTDDHDIAVDKDQI 257

  Fly   250 ----------------------------------RQAT--------------------------- 253
                                              ||.:                           
plant   258 KLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKMPDTGSMRSALF 322

  Fly   254 --------------------------------------------------QNTCLE--------- 259
                                                              |.|.:|         
plant   323 PHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSDHGDDSEDDLHSPLISRQTTSMEKDMPHTAHG 387

  Fly   260 ----------------------------------------------------------------- 259
                                                                             
plant   388 TLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQKEGGFKRIYLHQEGFPGSRRGS 452

  Fly   260 -------------------------------LFKRNNLKP------------------------- 268
                                           |.|.:.:.|                         
plant   453 IVSLPGGDGTGEADFVQASALVSQPALYSKDLLKEHTIGPAMVHPSETTKGSIWHDLHDPGVKRA 517

  Fly   269 LSISLGLMFFQQFSGINAVIFYTVQIFKDAG-------STIDSNLSTIIVGVVNFF----ATFMG 322
            |.:.:||...|||||||.|::||.||.:.||       ..|.|:.:::::..:..|    |..:.
plant   518 LVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVA 582

  Fly   323 IILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPI 387
            :.|:|..||:.||..:...:|.:|.:|  ......|...:.| ..|.....|:|...|.:||||.
plant   583 MRLMDLSGRRTLLLTTIPILIASLLVL--VISNLVHMNSIVH-AVLSTVSVVLYFCFFVMGFGPA 644

  Fly   388 PWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVII 452
            |.::..||.|.::||...::.....|.|..:||.:...|..::|..|.|.::..:|.:...||.|
plant   645 PNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFI 709

  Fly   453 FVPETRGKSLEEI 465
            .||||:|..||.|
plant   710 KVPETKGMPLEVI 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 147/726 (20%)
MFS 33..454 CDD:119392 138/711 (19%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 51/165 (31%)
MFS <516..713 CDD:421695 59/199 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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