DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and AT4G04760

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001319869.1 Gene:AT4G04760 / 825812 AraportID:AT4G04760 Length:478 Species:Arabidopsis thaliana


Alignment Length:488 Identity:143/488 - (29%)
Similarity:223/488 - (45%) Gaps:41/488 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VPADGLKANFTFSQVLAALSVSLC------SLVVGFVSAYTSPALVSMTDRTITSFEVTKDAG-- 71
            :||....::   |.:|:.:| :.|      :.:||...|:....::..:..|.||  :.||..  
plant     8 LPASSTSSS---SSLLSEIS-NACTRPFVLAFIVGSCGAFAFGCIIGYSAPTQTS--IMKDLNLS 66

  Fly    72 ----SWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLT 132
                |..|.|:.:..:.|.:..|.|.:.:||..||..|.:.|::....||.|..|.::..||.|.
plant    67 IADYSLFGSILTVGLILGALICGKLTDLVGRVKTIWITNILFVIGWFAIAFAKGVWLLDLGRLLQ 131

  Fly   133 GFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSFMNWSMLAFLGAALPVPF 197
            |..:||:....|||:.|.....:||...........:||.|.|..|:.:.|..||.||....:..
plant   132 GISIGISVYLGPVYITEIAPRNLRGAASSFAQLFAGVGISVFYALGTIVAWRNLAILGCIPSLMV 196

  Fly   198 LILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQ------SQADADRQATQNT 256
            |.|:..|||:|||....|:|......|..|||:::||..|..|:::      .|.|.|.:.    
plant   197 LPLLFFIPESPRWLAKVGREMEVEAVLLSLRGEKSDVSDEAAEILEYTEHVKQQQDIDDRG---- 257

  Fly   257 CLELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNLSTIIVGVVNFFATFM 321
            ..:||:|.....|:|.:.|:...|..|:|...|||..||...|  :.|:...|...||..|...:
plant   258 FFKLFQRKYAFSLTIGVVLIALPQLGGLNGYSFYTDSIFISTG--VSSDFGFISTSVVQMFGGIL 320

  Fly   322 GIILIDRLGRKILLYVSDIAMIV-TLSILGGFF----YCKAHGPDVSHLGWLPLTCFVIYILGFS 381
            |.:|:|..||:.||.||...|.: .|:....||    :|...|..|     |.|...::|...:.
plant   321 GTVLVDVSGRRTLLLVSQAGMFLGCLTTAISFFLKENHCWETGTPV-----LALFSVMVYFGSYG 380

  Fly   382 LGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVG 446
            .|.|.|||::..||.|..::|.|.::....:....::|..:|..| :...:.|.|.:|..:..:|
plant   381 SGMGSIPWIIASEIYPVDVKGAAGTMCNLVSSISAWLVAYSFSYL-LQWSSTGTFLMFATVAGLG 444

  Fly   447 LFFVIIFVPETRGKSLEEIERKMMGRVPMSSVV 479
            ..|:...||||:|||||||:.......|..|.:
plant   445 FVFIAKLVPETKGKSLEEIQSLFTDSPPQDSTI 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 137/458 (30%)
MFS 33..454 CDD:119392 126/443 (28%)
AT4G04760NP_001319869.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 292 1.000 Domainoid score I356
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I822
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.930

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