DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and TMT3

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:736 Identity:151/736 - (20%)
Similarity:257/736 - (34%) Gaps:319/736 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLAALAGG--IT- 88
            |.||.||:.::.:::.|:.:|..:.|::.:.    ..|.:.|:..  :.|::...:|.|.  || 
plant     3 SVVLVALAAAIGNMLQGWDNATIAGAVIYIK----KEFHLEKEPK--IEGLIVAMSLIGATLITT 61

  Fly    89 -GGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQ 152
             .||:.:.:||||.::.::|.:.:||:::..:.||.::|..|.|.||.:|:|...:|:|:.||..
plant    62 FSGPVSDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLVPIYISETAP 126

  Fly   153 PEVRGTLGLLPTALGNIGILV--CYVAGSFM----NWSMLAFLGAALPVP----FLILMIIIPET 207
            .|:||.|...|...|:.|:.:  |.|.|..:    :|.::  || .|.:|    |::....:||:
plant   127 SEIRGLLNTFPQFCGSGGMFLSYCLVFGMSLQESPSWRLM--LG-VLSIPSIAYFVLAAFFLPES 188

  Fly   208 PRWFVNRGQEERARKALKWLRGKEADVEPELKELM------------------------------ 242
            |||.|::|:.:.||:.|:.|||:| ||..||..|:                              
plant   189 PRWLVSKGRMDEARQVLQRLRGRE-DVSGELALLVEGLGVGKDTSIEEYVIGPDNEENEGGNELP 252

  Fly   243 ----------------------------------------------------------------- 242
                                                                             
plant   253 RKDQIKLYGPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLPSENMNA 317

  Fly   243 --------------------QSQADADR-------------------QAT------QNTCLELFK 262
                                :||.|.:|                   |.|      |.|...:.:
plant   318 SSRSMLFPNMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYHQRTVGTMHR 382

  Fly   263 R---------------------------------------------------------NNL---- 266
            |                                                         ||:    
plant   383 RQSSLFMANVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTNNIPFSR 447

  Fly   267 --------------------------------------------------------------KPL 269
                                                                          :.|
plant   448 RGSLLSFHPEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWRELKEPGVKRAL 512

  Fly   270 SISLGLMFFQQFSGINAVIFYTVQIFKDAG-STIDSNL------STIIVGVVNFFATFMGII--- 324
            .:.:||...|||:|||.|::||.||.::.| |::.:||      :::::..:........|:   
plant   513 MVGVGLQILQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSM 577

  Fly   325 -LIDRLGRKILLYVSDIAM----IVTLSI-----LGGFFYCKAHGPDVSHLGWLPLTCFVIYILG 379
             |:|..||:.|: :|.|.:    :|||.|     |||..........|:    :.|:|||     
plant   578 RLMDVTGRRSLM-LSTIPILILSLVTLVIGSLVNLGGSINALISTASVT----VYLSCFV----- 632

  Fly   380 FSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICI 444
              :|||.||.::..||.|..:||...::.....|.|..:||.|...:..::|..|.|.::..:|.
plant   633 --MGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCA 695

  Fly   445 VGLFFVIIFVPETRGKSLEEI 465
            |...||.:.||||:|..||.|
plant   696 VAWVFVYLKVPETKGMPLEVI 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 148/732 (20%)
MFS 33..454 CDD:119392 139/717 (19%)
TMT3NP_001190054.1 MFS 9..>186 CDD:119392 49/185 (26%)
MFS <512..703 CDD:119392 60/202 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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