DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and AT3G20460

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_188681.1 Gene:AT3G20460 / 821591 AraportID:AT3G20460 Length:488 Species:Arabidopsis thaliana


Alignment Length:440 Identity:127/440 - (28%)
Similarity:230/440 - (52%) Gaps:25/440 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SLC-SLVVGFVSAYTSPA---LVSMTDRTITSFEVTKDAGSWVGGIMPLAALAGGITGGPLIEYL 96
            :|| :...|..:.:||||   :::..:.::..|       |:.|.::.:..|.|....|.|.:..
plant    60 ALCGTFSYGTAAGFTSPAQTGIMAGLNLSLAEF-------SFFGAVLTIGGLVGAAMSGKLADVF 117

  Fly    97 GRRSTILATAVPFIVSS-LLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQPEVRGTLG 160
            |||.. |..:..|.::. |:||.:.....:..||...|...|:||..:|||:.|....:||||..
plant   118 GRRGA-LGVSNSFCMAGWLMIAFSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAPKKVRGTFS 181

  Fly   161 LLPTALGNIGILVCYVAGSFMNWSMLAFLGAALPVPF-LILMIIIPETPRWFVNRGQEERARKAL 224
            .:.:.:....:.|.|:.||.::|..||.: :.:|..| .:.:..|||:|||....|:.:.:..:|
plant   182 AINSLVMCASVAVTYLLGSVISWQKLALI-STVPCVFEFVGLFFIPESPRWLSRNGRVKESEVSL 245

  Fly   225 KWLRGKEADVEPELKELMQSQADADRQATQNTCLELFKRNNLKPLSISLGLMFFQQFSGINAVIF 289
            :.|||...|:..|..|: :...|..::..::...:||.....:.:::.:||:..||..|::...|
plant   246 QRLRGNNTDITKEAAEI-KKYMDNLQEFKEDGFFDLFNPRYSRVVTVGIGLLVLQQLGGLSGYTF 309

  Fly   290 YTVQIFKDAGSTIDSNLSTIIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFY 354
            |...|||.:|  ..:|:..::..||....:.:||:::|:.||:.||.|:.|.|.:...|.|..|.
plant   310 YLSSIFKKSG--FPNNVGVMMASVVQSVTSVLGIVIVDKYGRRSLLTVATIMMCLGSLITGLSFL 372

  Fly   355 CKAHGPDVSHLGWLPLTCF---VIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCT 416
            .:::|. :.|  :.|::.|   ::::...::|.|.|||:|:.|:.|..|:|.|.::....:|...
plant   373 FQSYGL-LEH--YTPISTFMGVLVFLTSITIGIGGIPWVMISEMTPINIKGSAGTLCNLTSWSSN 434

  Fly   417 FVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEIE 466
            :.|:.||..| ....:.|.|:::..|..||:.||:..||||||:|||||:
plant   435 WFVSYTFNFL-FQWSSSGVFFIYTMISGVGILFVMKMVPETRGRSLEEIQ 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 127/440 (29%)
MFS 33..454 CDD:119392 116/426 (27%)
AT3G20460NP_188681.1 MFS_GLUT6_8_Class3_like 54..481 CDD:340916 124/436 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 292 1.000 Domainoid score I356
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I822
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.920

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