DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and STP4

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001326818.1 Gene:STP4 / 821531 AraportID:AT3G19930 Length:514 Species:Arabidopsis thaliana


Alignment Length:418 Identity:124/418 - (29%)
Similarity:202/418 - (48%) Gaps:52/418 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLP 144
            :|||...:....:....||:.::......|.:.|.....|.|:.|:|.||.|.||.||.|:.|:|
plant    90 VAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVP 154

  Fly   145 VYLGETLQPEVRGTLGLLPTALGN-------IGILVCYVAGSF-------MNWSMLAFLGAALPV 195
            |||.|...|.:||       |..|       .||:|..:...|       :.|.:  .||.|. |
plant   155 VYLSEMAPPNLRG-------AFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRI--SLGLAC-V 209

  Fly   196 PFLILMI---IIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQ--- 254
            |.:::||   |:|:||...:.||..|.|::.|:.:||.. :|:.|.::|:    ||..::.|   
plant   210 PAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTN-EVDEEFQDLI----DASEESKQVKH 269

  Fly   255 ---NTCLELFKRNNLKPLSISLGLMFFQQFSGINAVIFYTVQIFKDAG-STIDSNLSTIIVGVVN 315
               |..|..::    ..|.::..:.||||.:|||.:.||...:|:..| .:..|.||.::.|::.
plant   270 PWKNIMLPRYR----PQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSKASLLSAMVTGIIE 330

  Fly   316 FFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLG------WLPLTCFV 374
            ...||:.:..:||.||:||.....|.|:|:...:|.....|.......::|      .:.|.|  
plant   331 LLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALIC-- 393

  Fly   375 IYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLF 439
            ||:.||:..:||:.||:..||.|.:||..|.::..:.|.|.||:|.:.|..:...| ..|.|:.|
plant   394 IYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHM-KFGLFFFF 457

  Fly   440 GAICIVGLFFVIIFVPETRGKSLEEIER 467
            ....::...|:.:.:|||:...:||:.|
plant   458 AFFVVIMTIFIYLMLPETKNVPIEEMNR 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 123/416 (30%)
MFS 33..454 CDD:119392 118/403 (29%)
STP4NP_001326818.1 MFS_STP 29..474 CDD:340919 118/405 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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