DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and STP6

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_187247.1 Gene:STP6 / 819766 AraportID:AT3G05960 Length:507 Species:Arabidopsis thaliana


Alignment Length:406 Identity:128/406 - (31%)
Similarity:213/406 - (52%) Gaps:27/406 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLP 144
            ||||............||||.|:...::.|::...|.|.|||::|::.||...||.||..:.::|
plant    88 LAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLVMLIIGRLFLGFGVGFGNQAVP 152

  Fly   145 VYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSF------MNWSMLAFLGAALPVPFLIL-MI 202
            ::|.|....::||.|.::...:..||||:..:...|      ..| .:|..||.:|...|:. .:
plant   153 LFLSEIAPAQLRGGLNIVFQLMVTIGILIANIVNYFTATVHPYGW-RIALGGAGIPAVILLFGSL 216

  Fly   203 IIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLELFKRNNLK 267
            :|.|||...:.|.:.|..::||:.:||.: |:..|.:.::.: .|...| .::...:|.|..:..
plant   217 LIIETPTSLIERNKNEEGKEALRKIRGVD-DINDEYESIVHA-CDIASQ-VKDPYRKLLKPASRP 278

  Fly   268 PLSISLGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSN-LSTIIVGVVNFFATFMGIILIDRLGR 331
            |..|.:.|..||||:||||::||...:|:..|...|:. ||.:|.|.:|..|||:||.|:||.||
plant   279 PFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAALLSAVITGSINVLATFVGIYLVDRTGR 343

  Fly   332 KILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGW------LPLTCFV-IYILGFSLGFGPIPW 389
            :.||..|.:.|::...|:|...     ..|:...|.      |.:..|| :|::||:..:||:.|
plant   344 RFLLLQSSVHMLICQLIIGIIL-----AKDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGW 403

  Fly   390 LMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLF-GAICIVGLFFVIIF 453
            |:..|..|.:.|....:|..:.|.|.|||:.:.|..:...|.: |.|:.| |.|.::|| |...|
plant   404 LIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSMLCGMRS-GIFFFFSGWIIVMGL-FAFFF 466

  Fly   454 VPETRGKSLEEIERKM 469
            :|||:|.:::::...:
plant   467 IPETKGIAIDDMRESV 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 128/402 (32%)
MFS 33..454 CDD:119392 123/389 (32%)
STP6NP_187247.1 MFS_STP 27..469 CDD:340919 124/391 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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