DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tret1-2 and INT1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_850393.1 Gene:INT1 / 818934 AraportID:AT2G43330 Length:509 Species:Arabidopsis thaliana


Alignment Length:467 Identity:147/467 - (31%)
Similarity:232/467 - (49%) Gaps:38/467 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FTFSQVLA-ALSVSLCSLVVGFVSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLA---ALA 84
            |..|.:|. .::..:..|:.|:.:...|.||:.:.|    .|||.|.:......|:.:|   |:.
plant    26 FGNSYILGLTVTAGIGGLLFGYDTGVISGALLYIKD----DFEVVKQSSFLQETIVSMALVGAMI 86

  Fly    85 GGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGE 149
            |...||.:.:|.||:...|...|.|...::::|.|.:..:::.||.|.|..||:||::.|||:.|
plant    87 GAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAE 151

  Fly   150 TLQPEVRGTLGLLPTALGNI--GILVCYVAGSFM-----NWS-MLAFLGAALPVPFLILMIIIPE 206
            ....||||  ||:.|.:..|  |..:.|:..|..     .|. ||...|....:.| |||:.:||
plant   152 ASPSEVRG--GLVSTNVLMITGGQFLSYLVNSAFTQVPGTWRWMLGVSGVPAVIQF-ILMLFMPE 213

  Fly   207 TPRWFVNRGQEERARKALKWLRGKEADV---EPELKELMQSQADADRQATQNTC--LELFKRNNL 266
            :|||...:.::..|.:.|    .:..|:   |.|:..|  |.|:.:.:..:.|.  |::|:...|
plant   214 SPRWLFMKNRKAEAIQVL----ARTYDISRLEDEIDHL--SAAEEEEKQRKRTVGYLDVFRSKEL 272

  Fly   267 KPLSIS-LGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSN----LSTIIVGVVNFFATFMGIILI 326
            :...:: .||..||||:|||.|::|:..|.:.||  ..||    ..::||..:|...|.:||..|
plant   273 RLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAG--FHSNQLALFLSLIVAAMNAAGTVVGIYFI 335

  Fly   327 DRLGRKILLYVSDIAMIVTLSILG-GFFYCKAHGPDVSHLGWLPLTCFVIYILGFSLGFGPIPWL 390
            |..|||.|...|...:|::|.||. .||.......|....|||.:....:||:.|:.|.||:||.
plant   336 DHCGRKKLALSSLFGVIISLLILSVSFFKQSETSSDGGLYGWLAVLGLALYIVFFAPGMGPVPWT 400

  Fly   391 MMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVP 455
            :..||.|.:.||....:....||....:|.:||..:..|.|....|.:...|.::.:.|||:|||
plant   401 VNSEIYPQQYRGICGGMSATVNWISNLIVAQTFLTIAEAAGTGMTFLILAGIAVLAVIFVIVFVP 465

  Fly   456 ETRGKSLEEIER 467
            ||:|.:..|:|:
plant   466 ETQGLTFSEVEQ 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 143/458 (31%)
MFS 33..454 CDD:119392 136/442 (31%)
INT1NP_850393.1 Sugar_tr 34..479 CDD:278511 144/459 (31%)
MFS 35..464 CDD:119392 136/443 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.