DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and AT2G20780

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_179671.2 Gene:AT2G20780 / 816607 AraportID:AT2G20780 Length:526 Species:Arabidopsis thaliana


Alignment Length:476 Identity:143/476 - (30%)
Similarity:240/476 - (50%) Gaps:53/476 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TFSQVLA-ALSVSLCSLVVGF-VSAYTSPALVSMTDRTITSFEVTKDAGSWVGGIMPLAALAGGI 87
            |...|:| |...||.::::|: |...:...|....|..||..:.....||     :.:.:|.|.:
plant    51 TRKYVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGS-----LSIISLFGSL 110

  Fly    88 TGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIASLSLPVYLGETLQ 152
            .||...:.:||:.|:...|:.|...:.::|.|.:..:::.||.|.|..:|:..:..|||:.|...
plant   111 AGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISP 175

  Fly   153 PEVRGTLGLLPTALGNIGILVCYVAG-SF------MNWSMLAFLGAALPVPFL-ILMIIIPETPR 209
            ...||.....|....|:|||:.||:. :|      ::|.::..:| .||..|: ..:.:|||:||
plant   176 TVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVG-ILPSVFIGFALCVIPESPR 239

  Fly   210 WFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADADRQATQNTCLELFKRNNL--KPLSIS 272
            |.|.:|:.:.||:.|.....::.:.|..|.|:..:.|..:....:....||...:.:  |.|.:.
plant   240 WLVMKGRVDSAREVLMKTNERDDEAEERLAEIQLAAAHTEGSEDRPVWRELLSPSPVVRKMLIVG 304

  Fly   273 LGLMFFQQFSGINAVIFYTVQIFKDAGSTIDSNL--STIIVGVVN----FFATFMGIILIDRLGR 331
            .|:..|||.:||:|.::|:.:|.|:||...::.|  :|:.|||..    .||||    |||.:||
plant   305 FGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATF----LIDSVGR 365

  Fly   332 KILLYVSDIAMIV-------TLSILGGFFYCKAHGPDVSHLGWLPLTCFVIYILG----FSLGFG 385
            |.|||||.|.|.:       ||:.||              .|.|.:|..::::.|    ||:|.|
plant   366 KPLLYVSTIGMTLCLFCLSFTLTFLG--------------QGTLGITLALLFVCGNVAFFSIGMG 416

  Fly   386 PIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFV 450
            |:.|::..||.|.::|..|:::....|..|:.:|..:|..::.|:...|.|::|..:..:.:.||
plant   417 PVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFV 481

  Fly   451 IIFVPETRGKSLEEIERKMMG 471
            .:.||||.|||||:||....|
plant   482 YVLVPETSGKSLEQIELMFQG 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 139/464 (30%)
MFS 33..454 CDD:119392 127/448 (28%)
AT2G20780NP_179671.2 MFS_PLT 61..496 CDD:340995 136/458 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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