DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and AT2G18480

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_179438.1 Gene:AT2G18480 / 816363 AraportID:AT2G18480 Length:508 Species:Arabidopsis thaliana


Alignment Length:514 Identity:153/514 - (29%)
Similarity:245/514 - (47%) Gaps:69/514 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LMRADTHVSF--SVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDR---TITS 63
            ::.||.| :|  |.|...:. .|.|.   .|:..|:.|::.|:.:...|.|.:.:.|.   ..|.
plant     1 MVHADGH-NFPGSDPNPHMN-KFAFG---CAIVASIISIIFGYDTGVMSGAQIFIRDDLKINDTQ 60

  Fly    64 FEVTKDAGSWVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCG 128
            .||       :.||:.|.||.|.:|.|...:.:|||.||..:||.|:|.|:|:....|..:::.|
plant    61 IEV-------LAGILNLCALVGSLTAGKTSDVIGRRYTIALSAVIFLVGSVLMGYGPNYPVLMVG 118

  Fly   129 RFLTGFCVGIASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVA----GSF---MNWSML 186
            |.:.|..||.|.:..|||..|......||.|..||....::|||:.||:    |..   :.|.::
plant   119 RCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLPELCISLGILLGYVSNYCFGKLTLKLGWRLM 183

  Fly   187 AFLGAALPVPFLILMIII---PETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADA 248
              ||.| ..|.|||...|   ||:|||.|.:|:.|.|:|.:..:...|.:.|...:::: :.|:.
plant   184 --LGIA-AFPSLILAFGITRMPESPRWLVMQGRLEEAKKIMVLVSNTEEEAEERFRDIL-TAAEV 244

  Fly   249 DRQATQNTCLELFKRNN---------LKP-------LSISLGLMFFQQFSGINAVIFYTVQIFKD 297
            |....:.....:.|:|:         :||       |..::|:.||:..:||.||:.|:.:|||.
plant   245 DVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKK 309

  Fly   298 AGSTIDSN--LSTIIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMI-------VTLSILGGFF 353
            ||......  |:|:.||:...|...:...|:|::||:.||..|...|:       |:|:::..| 
plant   310 AGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRF- 373

  Fly   354 YCKAHGPDVSHLGW---LPLTCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFC 415
                     ..|.|   |.:.....::..||:|.|||.|:...||.|.::|...||:..|.|...
plant   374 ---------GRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIM 429

  Fly   416 TFVVTKTFQDLTVAMGAHGAFWLFGAICIVGLFFVIIFVPETRGKSLEEIERKMMGRVP 474
            ...|:.:|..:|.|:...|.|::|..|.:...:|....:|||:|..|||:|:...|..|
plant   430 NATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFFFMLPETKGLPLEEMEKLFGGGGP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 142/476 (30%)
MFS 33..454 CDD:119392 134/461 (29%)
AT2G18480NP_179438.1 MFS_PLT 36..479 CDD:340995 138/463 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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