DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and PMT2

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:484 Identity:147/484 - (30%)
Similarity:231/484 - (47%) Gaps:37/484 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VSFSVPADGLKANFTFSQVLAALSVSLCSLVVGF-VSAYTSPALVSMTDRTITSFEVTKDAGSWV 74
            |:.|.|..|.::.|.|:   .|:..|:.|:::|: :...:..|:....|..::..::     ..:
plant    12 VAESEPPRGNRSRFAFA---CAILASMTSIILGYDIGVMSGAAIFIKDDLKLSDVQL-----EIL 68

  Fly    75 GGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVGIA 139
            .||:.:.:|.|....|...:::|||.||:.....|...:||:..|.|...|:.|||:.|..||.|
plant    69 MGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYA 133

  Fly   140 SLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSF-------MNWSMLAFLGAALPVPF 197
            .:..|||..|......||.|...|....|||||:.||:..|       :.|..:..:||...|..
plant   134 MMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSNYFFAKLPEHIGWRFMLGIGAVPSVFL 198

  Fly   198 LILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADAD------------R 250
            .|.::.:||:|||.|.:|:...|.|.|......:.:....|.::.::....|            :
plant   199 AIGVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTDDVIVVPNKK 263

  Fly   251 QATQNTCLELFKR--NNLKPLSIS-LGLMFFQQFSGINAVIFYTVQIFKDAG--STIDSNLSTII 310
            .|.:....:|..|  .:::.:.|: ||:.|.||.|||:||:.|:..||..||  |..|..|:|:.
plant   264 SAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVA 328

  Fly   311 VGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGW---LPLTC 372
            ||||......:|..|:||.||:.||..|...|..:|:.||.........|..: |.|   |.:|.
plant   329 VGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQT-LKWAIGLAVTT 392

  Fly   373 FVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGAFW 437
            .:.::..||||.||:.|:...||.|.::|...||:....|...:.::..||..|:..:...|||.
plant   393 VMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFL 457

  Fly   438 LFGAICIVGLFFVIIFVPETRGKSLEEIE 466
            ||..:.:....|...|:|||||..|||||
plant   458 LFAGVAVAAWVFFFTFLPETRGVPLEEIE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 141/464 (30%)
MFS 33..454 CDD:119392 129/448 (29%)
PMT2NP_179210.1 Sugar_tr 29..489 CDD:278511 141/464 (30%)
MFS 31..473 CDD:119392 129/447 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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