DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tret1-2 and PMT1

DIOPT Version :9

Sequence 1:NP_610694.1 Gene:Tret1-2 / 36249 FlyBaseID:FBgn0033644 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:486 Identity:146/486 - (30%)
Similarity:230/486 - (47%) Gaps:41/486 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VSFSVPADGLKANFTFSQVLAALSVSLCSLVVGFVSAYTSPALVSMTDRTITS---FEVTKDAGS 72
            ::.|.|..|.::.:.|:   .|:..|:.|:::|:.....|.|.:.:.|....|   .|:      
plant    12 IAESEPPRGNRSRYAFA---CAILASMTSIILGYDIGVMSGASIFIKDDLKLSDVQLEI------ 67

  Fly    73 WVGGIMPLAALAGGITGGPLIEYLGRRSTILATAVPFIVSSLLIACAVNVIMILCGRFLTGFCVG 137
             :.||:.:.:|.|....|...::||||.||:.....|...:||:..|.|...|:.|||:.|..||
plant    68 -LMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVG 131

  Fly   138 IASLSLPVYLGETLQPEVRGTLGLLPTALGNIGILVCYVAGSF-------MNWSMLAFLGAALPV 195
            .|.:..|||..|......||.|...|....|||||:.||:..|       :.|..:..:||...|
plant   132 YAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSV 196

  Fly   196 PFLILMIIIPETPRWFVNRGQEERARKALKWLRGKEADVEPELKELMQSQADAD----------- 249
            ...|.::.:||:|||.|.:|:...|.|.|......:.:....|.::.::....|           
plant   197 FLAIGVLAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPN 261

  Fly   250 -RQATQNTCLELFKR--NNLKPLSIS-LGLMFFQQFSGINAVIFYTVQIFKDAG--STIDSNLST 308
             :.|.:....:|..|  .:::.:.|: ||:.|.||.|||:||:.|:..||..||  |..|..|:|
plant   262 KKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLAT 326

  Fly   309 IIVGVVNFFATFMGIILIDRLGRKILLYVSDIAMIVTLSILGGFFYCKAHGPDVSHLGW---LPL 370
            :.||||......:|..::||.||:.||..|...|.::|:.||.........|..: |.|   |.:
plant   327 VAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQT-LKWAIGLAV 390

  Fly   371 TCFVIYILGFSLGFGPIPWLMMGEILPAKIRGPAASVVTAFNWFCTFVVTKTFQDLTVAMGAHGA 435
            |..:.::..||:|.||:.|:...||.|.::|...||:....|...:.::..||..|:..:...||
plant   391 TTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGA 455

  Fly   436 FWLFGAICIVGLFFVIIFVPETRGKSLEEIE 466
            |.||..:......|...|:|||||..|||:|
plant   456 FLLFAGVAAAAWVFFFTFLPETRGIPLEEME 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tret1-2NP_610694.1 Sugar_tr 31..467 CDD:278511 142/466 (30%)
MFS 33..454 CDD:119392 131/450 (29%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 142/466 (30%)
MFS 31..473 CDD:119392 131/449 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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